@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0669: (2016-03-17 )
MMNKENPLNKYHTGKFEKQRQDYPGLQSKMTPVPDTGESSYQGANKLTGKKAFVTGGDSGIGRAAVIAYAREGADVAINYHPDEEVDAQEVKAIVEEAGQKCVLLPGDLRKEGLAKDLVKKAYNELGGLDILVLNAGLQQYQLDIQKLPAEQLRDTFEVNVFSVVFAIQEALNYLKAGASIILTSSIQGVKPSAHLVDYAMTKSSLISLTKSLAAQLGEKGIRINAVAPGPIWTALQISGGQPQDSIPEFGQDQPLGRAGQPAELASAYVLLASDEASYTTGQVYGITGGAPIN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_8(3R3S)
?
[Raw transfer]




NAD_C_12(3R3S)
?
[Raw transfer]




NAD_A_5(3R3S)
?
[Raw transfer]




NAD_D_15(3R3S)
?
[Raw transfer]




NAD_A_5(3R3S)
?
[Raw transfer]




FMT_C_13(3R3S)
?
[Raw transfer]




FMT_B_9(3R3S)
?
[Raw transfer]




22 PsiBlast_CBE 93.1061% -72 - C2 -3R3S 11.7 ?
23 PsiBlast_CBE 92.8061% -71 - C2 -3R3S 11.7 ?
114 HHSearch 92.4460% -72 - C2 -3R3S 11.5 ?
21 PsiBlast_CBE 91.7661% -70 - C2 -3R3S 11.4 ?
1 PsiBlast_PDB 91.5461% -70 - C2 -3R3S 11.5 ?
29 PsiBlast_CBE 84.1347% -76 - C2 -3I3O - ? -
28 PsiBlast_CBE 83.9047% -74 - C2 -3I3O - ? -
30 PsiBlast_CBE 83.8747% -76 - C2 -3I3O - ? -
3 PsiBlast_PDB 83.7747% -77 - C2 -3IJR - ? -
27 PsiBlast_CBE 83.7147% -74 - C2 -3I3O - ? -
26 PsiBlast_CBE 83.3847% -76 - C2 -3I3O - ? -
2 PsiBlast_PDB 83.3447% -75 - C2 -3I3O - ? -
24 PsiBlast_CBE 82.7347% -77 - C2 -3I3O - ? -
13 PsiBlast_PDB 76.1531% -85 - C2 -3AY6 - DHG4_BACME -
55 PsiBlast_CBE 76.0131% -85 - C2 -3AY6 - DHG4_BACME -
16 PsiBlast_PDB 75.7931% -86 - C2 -3AUU - DHG4_BACME -
14 PsiBlast_PDB 75.7231% -84 - C2 -3AUS - DHG4_BACME -
58 PsiBlast_CBE 75.5731% -87 - C2 -3AUT - DHG4_BACME -
15 PsiBlast_PDB 75.1631% -82 - C2 -3AUT - DHG4_BACME -
97 PsiBlast_CBE 74.7235% -76 - C2 -3TOX - ? -