@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0727: (2016-03-18 )
MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKELVTVVKEKGRIADLASLVPSDAFGTTGIGHTRWATHGKPNHENAHPHQSKSGRFTIVHNGVIENYTLLKEEYLKNHSFVSDTDTEVIVQLIELFAAELSTKEAFKKALSLLHGSYAICLIDQTNTETLYAAKNKSPLLIGKGENFNVIASDAMAVLKETDEFVEIMDKEIVIVTKDGFTLETLEGEEITRASYKAELDASDIEKGTYPHYMLKEIDEQPAVTRKIIQAYQDEAGEINVDKTIIDEILSSDRIHIVACGTSYHAGLVGKNLIEKMAKIPVEVHVSSEFAYNLPLMSKKPLFIFITQSGETADSRQCLVKVKELGYRTLTLTNVPGSTLDREADHSMYLYAGPEIAVASTKAYTAQISVLAVLAVSLGREIGDEEALNINLAAELGIVATAMEAMVSSKEVIEHIAGEYLATSRNAFFLGRNIDYFVAMEAALKLKEISYIQAEGFASGELKHGTIALIEDGTPVLALITQESINWNIRGNVNEVLARGAKTCIFAMENVAQPGDRFVIPQVHPLLTPLASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTVE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



GLP_X_2(2VF5)
GLMS_ECOLI
[Raw transfer]



G6P_A_2(1MOR)
GLMS_ECOLI
[Raw transfer]



GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



AGP_A_6(1MOS)
GLMS_ECOLI
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



BG6_B_4(2PUW)
GFA1_CANAL
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



AGP_A_2(2ZJ4)
GFPT1_HUMAN
[Raw transfer]



G6Q_B_4(2J6H)
GLMS_ECOLI
[Raw transfer]



BG6_A_3(2PUW)
GFA1_CANAL
[Raw transfer]



GLP_A_2(1MOQ)
?
[Raw transfer]
21 PsiBlast_CBE 94.9641% -96 - C2 -4AMV - GLMS_ECOLI -
2 PsiBlast_PDB 94.9341% -94 - C2 -4AMV - GLMS_ECOLI -
22 PsiBlast_CBE 94.7441% -94 - C2 -4AMV - GLMS_ECOLI -
3 PsiBlast_PDB 94.2341% -92 - C2 -2J6H - GLMS_ECOLI -
23 PsiBlast_CBE 93.8141% -92 - C2 -2J6H 4.5 GLMS_ECOLI
27 PsiBlast_CBE 93.5241% -96 - C2 -3OOJ - GLMS_ECOLI -
28 PsiBlast_CBE 93.0141% -97 - C2 -3OOJ - GLMS_ECOLI -
25 PsiBlast_CBE 92.9741% -88 - C2 -1JXA - GLMS_ECOLI -
30 PsiBlast_CBE 92.9641% -95 - C2 -3OOJ - GLMS_ECOLI -
6 PsiBlast_PDB 92.9541% -89 - C2 -1JXA - GLMS_ECOLI -
31 PsiBlast_CBE 92.4441% -92 - C2 -3OOJ - GLMS_ECOLI -
24 PsiBlast_CBE 92.3541% -89 - C2 -1JXA - GLMS_ECOLI -
29 PsiBlast_CBE 92.1141% -92 - C2 -3OOJ - GLMS_ECOLI -
26 PsiBlast_CBE 91.1741% -93 - C2 -3OOJ - GLMS_ECOLI -
32 PsiBlast_CBE 90.9741% -93 - C2 -3OOJ - GLMS_ECOLI -
7 PsiBlast_PDB 90.4941% -91 - C2 -3OOJ - GLMS_ECOLI -
1 PsiBlast_PDB 81.2564%-116 - C2 -4S1W - ? -
12 PsiBlast_PDB 67.6635%-102 - C2 -2V4M - GFPT1_HUMAN -
42 PsiBlast_CBE 66.8435% -99 - C2 -2PUT - GFA1_CANAL -
34 PsiBlast_CBE 66.8235%-104 - C2 -2V4M - GFPT1_HUMAN -
8 PsiBlast_PDB 63.8341% -94 - C2 -1MOS 4.4 GLMS_ECOLI
9 PsiBlast_PDB 63.7741% -95 - C2 -1MOQ 4.3 GLMS_ECOLI
5 PsiBlast_PDB 63.6441% -95 - C2 -2VF5 3.3 GLMS_ECOLI
54 HHSearch 62.7641% -96 - C2 -1MOQ 4.3 GLMS_ECOLI
10 PsiBlast_PDB 62.6641% -90 - C2 -1MOR 4.2 GLMS_ECOLI
36 PsiBlast_CBE 62.5635% -97 - C2 -2PUW 3.0 GFA1_CANAL
18 PsiBlast_PDB 62.0935% -95 - C2 -2PUW 3.4 GFA1_CANAL
13 PsiBlast_PDB 61.2235% -97 - C2 -2ZJ3 4.4 GFPT1_HUMAN
49 HHSearch 60.9634% -96 - C2 -2ZJ3 4.4 GFPT1_HUMAN
14 PsiBlast_PDB 60.6135% -94 - C2 -2ZJ4 3.6 GFPT1_HUMAN
79 Fugue 38.6240% -67 * C2 *1MOQ Error ?