@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0736: (2016-03-18 )
MKIAIGNDHVGIELKPVIVAYLQDLGHEVDDFGAFSNERTDYPEYGKKVAESVAAGKSDLGILICGSGVGISIAANKVNGIRAVVCSEPYSAKLSREHNNTNILAFGSRVVGAELAKMIVQNWLDAEFEGGRHAKRVEMIARIEDEND

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

R52_D_8(3K7S)
?
[Raw transfer]



R52_C_7(3K7S)
?
[Raw transfer]



R5P_A_3(3HEE)
?
[Raw transfer]



R5P_B_4(3HEE)
?
[Raw transfer]



R52_B_6(3K7S)
?
[Raw transfer]



RES_B_4(3K8C)
?
[Raw transfer]



TG6_D_6(4LFL)
?
[Raw transfer]



TG6_B_5(4LFL)
?
[Raw transfer]



RB5_A_3(3PH3)
?
[Raw transfer]



RB5_A_3(3PH3)
?
[Raw transfer]



R52_A_5(3K7S)
?
[Raw transfer]



RES_A_3(3K8C)
?
[Raw transfer]



PSJ_D_6(4LFM)
?
[Raw transfer]



RB5_B_4(3PH3)
?
[Raw transfer]



RBL_D_6(4LFN)
?
[Raw transfer]



RBL_B_5(4LFN)
?
[Raw transfer]



AOS_A_3(3PH4)
?
[Raw transfer]



GOL_B_4(3HE8)
?
[Raw transfer]



AOS_B_4(3PH4)
?
[Raw transfer]



PSJ_B_5(4LFM)
?
[Raw transfer]



MLA_A_2(3SGW)
RPIB_COCIM
[Raw transfer]



GOL_A_3(3HE8)
?
[Raw transfer]



GOL_A_3(3HE8)
?
[Raw transfer]
75 HHSearch 94.8267%-109 - C10 -2VVR - RPIB_ECOLI -
2 PsiBlast_PDB 94.5166%-110 - C10 -2VVR - RPIB_ECOLI -
1 PsiBlast_PDB 94.2667%-110 - C10 -1NN4 - RPIB_ECOLI -
78 HHSearch 91.5359%-117 * C10 *3PH3 1.8 ?
6 PsiBlast_PDB 91.2959%-118 - C10 -3PH3 1.8 ?
5 PsiBlast_PDB 90.7659%-117 - C10 -3PH4 2.3 ?
4 PsiBlast_PDB 90.7360%-114 - C10 -3HEE 3.3 ?
23 PsiBlast_CBE 90.5559%-114 - C10 -3PH4 2.1 ?
22 PsiBlast_CBE 90.4160%-115 - C10 -3HE8 2.3 ?
24 PsiBlast_CBE 90.3359%-115 - C10 -3PH3 1.4 ?
76 HHSearch 90.1559%-114 - C10 -3HE8 2.1 ?
21 PsiBlast_CBE 90.0960%-114 - C10 -3HEE 3.1 ?
3 PsiBlast_PDB 89.9860%-115 - C10 -3HE8 2.1 ?
27 PsiBlast_CBE 84.5147%-104 - C10 -4LFM 2.4 ?
28 PsiBlast_CBE 84.1147%-104 - C10 -4LFL 3.2 ?
26 PsiBlast_CBE 84.0047%-102 - C10 -4LFN 2.6 ?
9 PsiBlast_PDB 83.6747%-106 - C10 -4LFK - ? -
10 PsiBlast_PDB 83.6147%-106 - C10 -4LFL 3.5 ?
11 PsiBlast_PDB 83.3047%-104 - C10 -4LFM 3.3 ?
8 PsiBlast_PDB 82.5944%-119 - C10 -4EM8 - ? -
12 PsiBlast_PDB 81.9547%-102 - C10 -4LFN 2.5 ?
29 PsiBlast_CBE 81.9140%-123 - C10 -3K8C 3.2 ?
31 PsiBlast_CBE 81.6740%-117 - C10 -3K7S 3.4 ?
32 PsiBlast_CBE 81.3740%-118 - C10 -3K7S 3.5 ?
30 PsiBlast_CBE 81.0940%-118 - C10 -3K7S 3.3 ?
14 PsiBlast_PDB 80.8240%-115 - C10 -3K7S 3.5 ?
15 PsiBlast_PDB 80.7740%-119 - C10 -3K8C 3.4 ?
19 PsiBlast_PDB 80.3735%-106 - C10 -3SGW 2.9 RPIB_COCIM