@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0811: (2016-03-18 )
MTKEKVLWGYDEKTGPEMWGHICSDFEIAHTGKAQSPVDIEQADVVKLKPSTMKFYYKETDYTIRRIEQSVHVFPHDKEQGLRFNGEYYPLVSFHAHIPAEHLLDGYIYPIEWHFVHEKPDGTTLVMSAWMDIDNTNNIEFKNLPTYFPEVFADFETEREITLDVNEFMPEERVFYTYQGSRTTPPTVEGVTWIVLKNAKTLGQEDFTEFEKAIGNTSRPVQDLNGREITFYN

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B30_A_5(2FOY)
CAH1_HUMAN
[Raw transfer]




SAN_A_4(4COQ)
?
[Raw transfer]




ETS_A_4(3FW3)
CAH4_HUMAN
[Raw transfer]




SUA_A_4(3K34)
CAH2_HUMAN
[Raw transfer]




SAN_B_11(4COQ)
?
[Raw transfer]




M25_A_7(2NMX)
CAH1_HUMAN
[Raw transfer]




M28_A_6(2NN1)
CAH1_HUMAN
[Raw transfer]




AZM_A_4(4G7A)
?
[Raw transfer]




AZM_B_6(4G7A)
?
[Raw transfer]




AZM_A_4(4X5S)
?
[Raw transfer]




AZM_B_7(4X5S)
?
[Raw transfer]




ASC_A_5(4TWL)
?
[Raw transfer]




ACY_A_8(1Y7W)
?
[Raw transfer]




PPF_A_5(2IT4)
CAH1_HUMAN
[Raw transfer]




ACY_A_11(1KEQ)
CAH5A_MOUSE
[Raw transfer]




26 PsiBlast_CBE 98.3633% -76 - C5 -4COQ 2.6 ?
3 PsiBlast_PDB 97.9733% -83 - C5 -4UOV - ? -
22 PsiBlast_CBE 97.7633% -75 - C5 -4UOV - ? -
2 PsiBlast_PDB 97.0833% -76 - C5 -4COQ 2.6 ?
1 PsiBlast_PDB 96.1933% -79 - C5 -4C3T - ? -
25 PsiBlast_CBE 95.5633% -80 - C5 -4UOV - ? -
21 PsiBlast_CBE 95.4933% -81 - C5 -4UOV - ? -
27 PsiBlast_CBE 94.8833% -77 - C5 -4C3T - ? -
4 PsiBlast_PDB 94.2331% -71 - C5 -4XZ5 - ? -
6 PsiBlast_PDB 93.4531% -86 - C5 -1KOQ - CAH_NEIGO -
32 PsiBlast_CBE 93.3831% -82 - C5 -1KOP - CAH_NEIGO -
5 PsiBlast_PDB 93.0831% -85 - C5 -1KOP - CAH_NEIGO -
30 PsiBlast_CBE 92.8731% -72 - C5 -4XZ5 - ? -
29 PsiBlast_CBE 92.8431% -71 - C5 -4XZ5 - ? -
31 PsiBlast_CBE 92.6531% -82 - C5 -1KOQ - CAH_NEIGO -
28 PsiBlast_CBE 92.6331% -72 - C5 -4XZ5 - ? -
35 HHSearch 92.5031% -82 - C5 -1KOP - CAH_NEIGO -
7 PsiBlast_PDB 91.3732% -82 - C5 -4G7A 2.9 ?
33 PsiBlast_CBE 90.7532% -82 - C5 -4G7A 3.1 ?
50 Fugue 88.5531% -86 - C5 -1KOQ - CAH_NEIGO -
34 PsiBlast_CBE 83.4831% -70 - C5 -4X5S 2.9 ?
8 PsiBlast_PDB 83.3131% -70 - C5 -4X5S 2.9 ?