@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0814: (2016-03-18 )
MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGMTADMLREEIQKTKALTDKAFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_7(2Z6J)
?
[Raw transfer]




FMN_A_9(2Z6I)
?
[Raw transfer]




FMN_B_9(2Z6J)
?
[Raw transfer]




FMN_A_9(2Z6I)
?
[Raw transfer]




FMN_B_10(4IQL)
?
[Raw transfer]




FMN_A_3(4IQL)
?
[Raw transfer]




TUI_B_10(2Z6J)
?
[Raw transfer]




TUI_A_8(2Z6J)
?
[Raw transfer]




103 HHSearch 98.9351%-109 - C4 -3BO9 - ? -
3 PsiBlast_PDB 97.5550%-109 - C4 -3BO9 - ? -
102 HHSearch 96.2950%-105 * C4 *2Z6I 9.5 ?
2 PsiBlast_PDB 93.3548%-106 - C4 -2Z6I 9.5 ?
21 PsiBlast_CBE 91.8850%-108 - C4 -2Z6J 8.9 ?
1 PsiBlast_PDB 91.5850%-109 - C4 -2Z6J 8.9 ?
4 PsiBlast_PDB 90.7342%-101 - C4 -4IQL 9.4 ?
22 PsiBlast_CBE 90.3242%-102 - C4 -4IQL 9.1 ?
104 HHSearch 89.0236%-103 - C4 -2GJL - 2NPD_PSEAE -
6 PsiBlast_PDB 87.9736%-102 - C4 -2GJN - 2NPD_PSEAE -
5 PsiBlast_PDB 87.8836%-103 - C4 -2GJL - 2NPD_PSEAE -
125 Fugue 86.8735%-100 - C4 -2GJL - 2NPD_PSEAE -
8 PsiBlast_PDB 78.9232%-108 - C4 -4Q4K - ? -
23 PsiBlast_CBE 78.4932%-107 - C4 -4QIS - ? -
26 PsiBlast_CBE 78.3632%-109 - C4 -4QIU - ? -
24 PsiBlast_CBE 78.1532%-107 - C4 -4Q4K - ? -
10 PsiBlast_PDB 77.8432%-108 - C4 -4QIU - ? -
7 PsiBlast_PDB 77.7832%-110 - C4 -4QIS - ? -
25 PsiBlast_CBE 77.3032%-111 - C4 -4QIT - ? -
9 PsiBlast_PDB 76.6632%-107 - C4 -4QIT - ? -