@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0818: (2016-03-18 )
MLWVKESIEQLLSKLHTNLDTGLTKEQVKQKHAEFGTNEFEEGKKESLLQKIGHHLVEITTIVLLFAAAISAYLAITTGYGWAKVVVILGIVVLNMVLGIYQENSAEKALAALQSMNAHLTTVIRDGVRMQVDATELVPGDIIEIVAGDMIPADARIISSSSLQVEESALTGESVPVEKDANAVVSEKAPIGDRLNMLYSGCLVTNGRATAVVVEIGMETEMGKIAGLLNSTSKLMTPLQLRLKELAKRLSIVALLAGILIFIIDVYVYGETIIETLMIAISLAVAAVPETLPVIVTLTLAYGVQNMVRKNTIIRRIPAVETIGNTSVICSDKTGTLTQNKMIIQQIWAADHTPIKATAEFDTAEQKVLEMLSLSSNATIDVTDGEETIIGDPTESAIIRLLEEKGTTKKALEAKYPRVFELPFDSDRKLMTTIHQVEDGFLSITKGAFDRIPVNFSEAFLAEAERVHDSFAEDALRVLVVAYKKYPEMPTDLSSEALETDLTFAGMVGMIDPPRPESKAAVLAAKKAGIKTVMITGDHIVTASAIAKEIGILTDGDKAITGAELAEMSEADLEKNIRDYAVYARVSPEDKIRIVKAWQKNGEIVTMTGDGVNDAPALKAADVGAAMGITGTDVSKNAADMVITDDNFATIVDAVKEGRTAYENIRKTIYFLLSTNFSQIFIMLIAIILGWGAPVVAVQLLLINVVSDGIPGFFLSREKADDSIMERKPIPKNAGIFANGLGKKMATQAVVFTIVTLAGFYIGQFVTINNSIGASYEVGMTMAFVILAWSSVAHIFNVRSDKSIFTIGFLSNRGLFFSAICSMLIILGLAIIPPLANMFFLVEMSLTHWILAFILSMFPLLFVEIQKLIQRKRAKA

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_6(3TLM)
AT2A1_BOVIN
[Raw transfer]




ACP_A_6(1T5S)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(3N8G)
AT2A1_RABIT
[Raw transfer]




ADP_A_8(1T5T)
AT2A1_RABIT
[Raw transfer]




ACP_A_5(4XOU)
AT2A1_RABIT
[Raw transfer]




TM1_A_5(3W5B)
AT2A1_RABIT
[Raw transfer]




ADP_A_4(2OA0)
AT2A1_RABIT
[Raw transfer]




ADP_A_5(3FPS)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2BY4)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C8K)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C88)
AT2A1_RABIT
[Raw transfer]




GOL_A_3(4UU0)
AT2A1_RABIT
[Raw transfer]




TM1_A_4(3AR5)
AT2A1_RABIT
[Raw transfer]




128_A_4(3AR7)
AT2A1_RABIT
[Raw transfer]




ACP_A_4(3AR2)
?
[Raw transfer]




12D_A_5(3AR6)
AT2A1_RABIT
[Raw transfer]




ATP_A_2(3AR4)
AT2A1_RABIT
[Raw transfer]




ADP_A_9(3AR3)
?
[Raw transfer]




ATP_A_2(3AR4)
AT2A1_RABIT
[Raw transfer]




ACP_A_5(2DQS)
AT2A1_RABIT
[Raw transfer]




ADP_A_7(2ZBD)
?
[Raw transfer]




MF4_A_4(2O9J)
AT2A1_RABIT
[Raw transfer]




MF4_A_3(3FPB)
AT2A1_RABIT
[Raw transfer]




ACP_A_8(4UU1)
AT2A1_RABIT
[Raw transfer]




60 PsiBlast_CBE 92.2432% -95 - C2 -2AGV - AT2A1_RABIT -
10 PsiBlast_PDB 92.1032% -95 - C2 -2AGV - AT2A1_RABIT -
20 PsiBlast_PDB 91.8732% -93 - C2 -2EAU - AT2A1_RABIT -
55 PsiBlast_CBE 91.4732% -94 - C2 -2YFY - ? -
66 PsiBlast_CBE 91.2232% -99 - C2 -3W5B 5.7 AT2A1_RABIT
26 PsiBlast_CBE 91.1732% -93 - C2 -4J2T - AT2A1_RABIT -
39 PsiBlast_CBE 91.0032% -92 - C2 -3FGO - ? -
33 PsiBlast_CBE 90.8032% -93 - C2 -3NAL - ? -
36 PsiBlast_CBE 90.7732% -90 - C2 -3N5K - AT2A1_RABIT -
21 PsiBlast_CBE 90.6632% -92 - C2 -4BEW - ? -
17 PsiBlast_PDB 90.5332% -95 - C2 -2OA0 4.2 AT2A1_RABIT
13 PsiBlast_PDB 90.4232% -94 - C2 -2C8K 3.7 AT2A1_RABIT
31 PsiBlast_CBE 90.3732% -94 - C2 -3NAN - ? -
63 PsiBlast_CBE 90.3632% -91 - C2 -1WPG - AT2A1_RABIT -
37 PsiBlast_CBE 90.3132% -94 - C2 -3FPS 4.5 AT2A1_RABIT
40 PsiBlast_CBE 90.3032% -91 - C2 -3FGO - AT2A1_RABIT -
122 Fugue 90.2934% -95 - C2 -1SU4 - AT2A1_RABIT -
56 PsiBlast_CBE 90.1832% -95 - C2 -2EAT - AT2A1_RABIT -
62 PsiBlast_CBE 90.1532% -91 - C2 -1WPG - AT2A1_RABIT -
18 PsiBlast_PDB 90.1432% -86 - C2 -3B9B - AT2A1_RABIT -
12 PsiBlast_PDB 89.6732% -92 - C2 -2C88 4.3 AT2A1_RABIT
16 PsiBlast_PDB 89.6432% -91 - C2 -2O9J 2.8 AT2A1_RABIT
6 PsiBlast_PDB 89.0232% -93 - C2 -1T5T 6.8 AT2A1_RABIT
11 PsiBlast_PDB 88.9532% -91 - C2 -2BY4 4.1 AT2A1_RABIT
38 PsiBlast_CBE 88.7532% -91 - C2 -3FPB 2.9 AT2A1_RABIT
23 PsiBlast_CBE 88.5132% -91 - C2 -4XOU 7.2 AT2A1_RABIT
5 PsiBlast_PDB 88.5032% -93 - C2 -1T5S 7.0 AT2A1_RABIT
34 PsiBlast_CBE 88.0732% -91 - C2 -3N8G 6.9 AT2A1_RABIT
72 PsiBlast_CBE 86.8132% -88 - C2 -3TLM 6.7 AT2A1_BOVIN
103 HHSearch 66.6934% -38 * C2 *3AR4 1.7 AT2A1_RABIT
54 PsiBlast_CBE 65.7432% -41 - C2 -2ZBD 2.2 ?
49 PsiBlast_CBE 64.8432% -41 - C2 -3AR2 3.3 ?
45 PsiBlast_CBE 64.2232% -37 - C2 -3AR6 3.0 AT2A1_RABIT
24 PsiBlast_CBE 63.9132% -37 - C2 -4UU1 2.5 AT2A1_RABIT
25 PsiBlast_CBE 63.3532% -36 - C2 -4UU0 2.4 AT2A1_RABIT
47 PsiBlast_CBE 63.2932% -36 - C2 -3AR4 1.7 AT2A1_RABIT
58 PsiBlast_CBE 63.0032% -35 - C2 -2DQS 2.5 AT2A1_RABIT
44 PsiBlast_CBE 62.9332% -36 - C2 -3AR7 1.3 AT2A1_RABIT
48 PsiBlast_CBE 62.6532% -37 - C2 -3AR3 4.3 ?
46 PsiBlast_CBE 62.3932% -36 - C2 -3AR5 2.0 AT2A1_RABIT