@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0841: (2016-03-19 )
LEIYRKSAAETFTQLEATEKGLTTSEVTKRQEKYGFNELKNKKKDPLWKLFLETFKDPMVIVLVIAALVQLVLGEVVESLIIFLVLIVNSIISVVQTRKAESSLDALREMSAPVAKVIRDGSKQSIHARELVPGDVVILDAGDFVPADGRLFESGSLKIDEGMLTGESEAVEKYIDTIPDEVGLGDRVNMVFSGSLVVYGRGMFVVTGTASETEIGKIAGLLETAEAKQTPLQRKLESFSKKLGLGILALCVLIFAVEAGRVLLGDNSADMATAILNAFMFAVAVAVAAIPEALSSIVTIVLAVGTNKMAKQHAIIRKLPAVETLGSTSVICTDKTGTLTQNKMTVVDYYLPDGTKENFPESPENWSEGERRLIHIAVLCNDSNINSEGKELGDPTEVALIAFSNKNNQDYNEIREKFIREGEIPFDSDRKLMSTLHTFNENKAMLTKGGPDVMFARCSYVFLDGEEKPMTEEILAKLKETNEEFSNQALRVLAYGYKRMPADTTELKLEDEQDIVLVGLTAMIDPPREAVYASIEESKKAGIRTVMITGDHKTTAQAIGRDIGLMDADDIALTGQELDAMPEEELDKKLEHIAVYARVSPENKIRIVKAWQKKGKITAMTGDGVNDAPALKQADIGVAMGSGTDVAKDSAAMILTDDNFVSIVDAVGVGRTVFDNIKKSIAYLFAGNLGAIIAILFALVLDWINPFTALQLLFINLVNDSLPAIALGMEKAEPDVMKRKPRDINEGIFAGGTMRAVISRGVLIGIAVIISQYIGMQISPEMSVAMAFTTLILARTLQTFAARSNVQTAFGAGFFSNKYVIGAVLLCFVLYGITVLPGAREIFSIPASFGLHEWSIAAGLALAAVVMMEIIKVVQNKFFK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_6(1T5S)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(3N8G)
AT2A1_RABIT
[Raw transfer]




ACP_A_6(3TLM)
AT2A1_BOVIN
[Raw transfer]




ACP_A_5(4XOU)
AT2A1_RABIT
[Raw transfer]




ADP_A_8(1T5T)
AT2A1_RABIT
[Raw transfer]




TM1_A_5(3W5B)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C88)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2BY4)
AT2A1_RABIT
[Raw transfer]




ACP_A_3(2C8K)
AT2A1_RABIT
[Raw transfer]




12D_A_5(3AR6)
AT2A1_RABIT
[Raw transfer]




128_A_4(3AR7)
AT2A1_RABIT
[Raw transfer]




GOL_A_3(4UU0)
AT2A1_RABIT
[Raw transfer]




ATP_A_7(3FPB)
AT2A1_RABIT
[Raw transfer]




ACP_A_7(4H1W)
AT2A1_RABIT
[Raw transfer]




TM1_A_4(3AR5)
AT2A1_RABIT
[Raw transfer]




ACP_A_4(3AR2)
?
[Raw transfer]




ADP_A_4(2OA0)
AT2A1_RABIT
[Raw transfer]




ADP_A_5(3FPS)
AT2A1_RABIT
[Raw transfer]




ADP_A_7(2ZBD)
?
[Raw transfer]




MF4_A_4(2O9J)
AT2A1_RABIT
[Raw transfer]




ACP_A_8(4UU1)
AT2A1_RABIT
[Raw transfer]




101 Fugue 90.8737% -92 - C2 -1SU4 - AT2A1_RABIT -
63 PsiBlast_CBE 89.5738% -78 - C2 -1WPG - AT2A1_RABIT -
62 PsiBlast_CBE 89.5438% -77 - C2 -1WPG - AT2A1_RABIT -
55 PsiBlast_CBE 89.3938% -80 - C2 -2YFY - ? -
64 PsiBlast_CBE 89.2438% -79 - C2 -1WPG - AT2A1_RABIT -
9 PsiBlast_PDB 89.1838% -76 - C2 -1WPG - AT2A1_RABIT -
36 PsiBlast_CBE 89.0938% -75 - C2 -3N5K - AT2A1_RABIT -
61 PsiBlast_CBE 88.9838% -80 - C2 -2AGV - AT2A1_RABIT -
31 PsiBlast_CBE 88.9838% -80 - C2 -3NAN - ? -
11 PsiBlast_PDB 88.8438% -80 - C2 -2AGV - AT2A1_RABIT -
13 PsiBlast_PDB 88.7838% -79 - C2 -2C88 4.3 AT2A1_RABIT
15 PsiBlast_PDB 88.7738% -77 - C2 -2C8L - AT2A1_RABIT -
18 PsiBlast_PDB 88.7338% -79 - C2 -2OA0 4.2 AT2A1_RABIT
32 PsiBlast_CBE 88.6438% -79 - C2 -3NAM - ? -
25 PsiBlast_CBE 88.5538% -80 - C2 -4J2T - AT2A1_RABIT -
26 PsiBlast_CBE 88.5038% -86 - C2 -4H1W 3.8 AT2A1_RABIT
57 PsiBlast_CBE 88.4138% -80 - C2 -2EAT - AT2A1_RABIT -
112 HHSearch 88.3932% -77 - C2 -2ZXE - ? -
12 PsiBlast_PDB 88.3238% -77 - C2 -2BY4 4.0 AT2A1_RABIT
56 PsiBlast_CBE 88.2638% -78 - C2 -2EAU - AT2A1_RABIT -
14 PsiBlast_PDB 88.0338% -81 - C2 -2C8K 3.7 AT2A1_RABIT
2 PsiBlast_PDB 88.0338% -86 - C2 -3W5B 5.7 AT2A1_RABIT
37 PsiBlast_CBE 87.7738% -79 - C2 -3FPS 4.6 AT2A1_RABIT
1 PsiBlast_PDB 86.8335% -86 - C2 -3TLM 6.7 AT2A1_BOVIN
6 PsiBlast_PDB 86.3638% -76 - C2 -1T5S 7.0 AT2A1_RABIT
17 PsiBlast_PDB 86.2338% -75 - C2 -2O9J 2.8 AT2A1_RABIT
38 PsiBlast_CBE 86.1538% -76 - C2 -3FPB 3.7 AT2A1_RABIT
22 PsiBlast_CBE 85.9838% -76 - C2 -4XOU 7.2 AT2A1_RABIT
34 PsiBlast_CBE 85.8738% -75 - C2 -3N8G 6.8 AT2A1_RABIT
7 PsiBlast_PDB 85.1338% -76 - C2 -1T5T 6.5 AT2A1_RABIT
54 PsiBlast_CBE 65.8138% -8 - C2 -2ZBD 2.0 ?
49 PsiBlast_CBE 64.8738% -10 - C2 -3AR2 3.4 ?
44 PsiBlast_CBE 64.6638% -5 - C2 -3AR7 2.0 AT2A1_RABIT
46 PsiBlast_CBE 64.4438% -6 - C2 -3AR5 1.8 AT2A1_RABIT
23 PsiBlast_CBE 63.7838% -7 - C2 -4UU1 2.5 AT2A1_RABIT
45 PsiBlast_CBE 63.6238% -4 - C2 -3AR6 3.9 AT2A1_RABIT
24 PsiBlast_CBE 62.8738% -6 - C2 -4UU0 2.3 AT2A1_RABIT