@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0906: (2016-03-19 )
MEKHYDYIAIGGGSGGIASINRAAMHGAKCALIEPKFLGGTCVNVGCVPKKVMWYGAQIKEAMDLYADAYGYQVDASFNFQKLVENREAYIERIRGSYKNGLDNNNVDWIKGYAEFVDEKTLRVNGELVTADHILIATGGEPALPSIPGAEFGITSDGFFALKELPKKVAVVGAGYIAVELAGVLQQLGSETHLFVRKHAPLRNFDPLLTDTLTEIIEQSDMTLHKHAIPQKVEKNPDGSLTLSLEDGRTETVDTLIWAIGRKPVIKGLQIEKSGVELLESGHIAVDKFQNTNVAGIYAVGDVTGHYELTPVAIAAGRRLSERLFNNKKDAHLNYENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDHREPCRMKLICEGKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK

Atome Classification :

(71 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(1GES)
GSHR_ECOLI
[Raw transfer]




FAD_A_3(1GER)
GSHR_ECOLI
[Raw transfer]




FAD_C_3(1ONF)
GSHR_PLAFK
[Raw transfer]




FAD_A_3(1GES)
GSHR_ECOLI
[Raw transfer]




FAD_C_3(1GRT)
GSHR_HUMAN
[Raw transfer]




FAD_B_4(1GER)
GSHR_ECOLI
[Raw transfer]




FAD_A_3(4APN)
?
[Raw transfer]




FAD_E_5(4GR1)
GSHR_HUMAN
[Raw transfer]




FAD_C_3(1XAN)
GSHR_HUMAN
[Raw transfer]




FAD_A_3(2R9Z)
GASHR_MARGR
[Raw transfer]




FAD_C_3(1GRA)
GSHR_HUMAN
[Raw transfer]




FAD_A_3(1GEU)
GSHR_ECOLI
[Raw transfer]




FAD_A_3(1GER)
GSHR_ECOLI
[Raw transfer]




FAD_E_5(3GRS)
GSHR_HUMAN
[Raw transfer]




FAD_A_3(2R9Z)
GASHR_MARGR
[Raw transfer]




FAD_B_4(1GES)
GSHR_ECOLI
[Raw transfer]




FAD_C_3(1ONF)
GSHR_PLAFK
[Raw transfer]




FAD_C_3(3GRT)
GSHR_HUMAN
[Raw transfer]




FAD_A_3(3DK4)
GSHR_HUMAN
[Raw transfer]




FAD_E_5(1GRF)
GSHR_HUMAN
[Raw transfer]




FAD_B_5(4APN)
?
[Raw transfer]




FAD_X_2(3DJG)
GSHR_HUMAN
[Raw transfer]




FAD_B_8(3SQP)
GSHR_HUMAN
[Raw transfer]




FAD_A_5(3DK9)
GSHR_HUMAN
[Raw transfer]




FAD_A_2(2X8H)
?
[Raw transfer]




FAD_A_3(3DH9)
TRXR1_DROME
[Raw transfer]




FAD_E_5(1GRB)
GSHR_HUMAN
[Raw transfer]




FAD_A_3(3DGH)
TRXR1_DROME
[Raw transfer]




FAD_A_3(3SQP)
GSHR_HUMAN
[Raw transfer]




FAD_A_5(3O0H)
?
[Raw transfer]




FAD_A_3(1BWC)
GSHR_HUMAN
[Raw transfer]




FAD_B_5(1GET)
GSHR_ECOLI
[Raw transfer]




FAD_A_9(2GH5)
GSHR_HUMAN
[Raw transfer]




FAD_C_3(2GRT)
GSHR_HUMAN
[Raw transfer]




FAD_C_3(2NVK)
TRXR1_DROME
[Raw transfer]




FAD_A_3(1FEC)
TYTR_CRIFA
[Raw transfer]




FAD_A_3(4NEV)
?
[Raw transfer]




FAD_A_5(3O0H)
?
[Raw transfer]




FAD_A_3(4B1B)
TRXR_PLAF5
[Raw transfer]




FAD_B_7(2X8C)
?
[Raw transfer]




FAD_A_3(1GET)
GSHR_ECOLI
[Raw transfer]




FAD_A_2(2V6O)
?
[Raw transfer]




FAD_A_5(4J57)
TRXR2_PLAF7
[Raw transfer]




FAD_B_10(2R9Z)
GASHR_MARGR
[Raw transfer]




FAD_B_4(4B1B)
TRXR_PLAF5
[Raw transfer]




FAD_B_8(4NEV)
?
[Raw transfer]




FAD_A_2(2X99)
?
[Raw transfer]




FAD_B_5(1GEU)
GSHR_ECOLI
[Raw transfer]




FAD_A_11(3DJJ)
GSHR_HUMAN
[Raw transfer]




FAD_C_3(1ZKQ)
TRXR2_MOUSE
[Raw transfer]




FAD_E_5(1GRE)
GSHR_HUMAN
[Raw transfer]




FAD_A_2(2X8G)
?
[Raw transfer]




FAD_A_3(2X8C)
?
[Raw transfer]




FAD_A_5(3DK9)
GSHR_HUMAN
[Raw transfer]




FAD_A_4(3DK8)
GSHR_HUMAN
[Raw transfer]




FAD_B_6(3DGH)
TRXR1_DROME
[Raw transfer]




FAD_A_3(4ADW)
?
[Raw transfer]




FAD_A_8(2AAQ)
GSHR_HUMAN
[Raw transfer]




FAD_B_4(3DH9)
TRXR1_DROME
[Raw transfer]




ELI_A_7(2GH5)
GSHR_HUMAN
[Raw transfer]




FAD_B_11(2WBA)
TYTR_TRYBB
[Raw transfer]




FAD_A_2(3H4K)
?
[Raw transfer]




FAD_A_3(2WBA)
TYTR_TRYBB
[Raw transfer]




FAD_B_6(4ADW)
?
[Raw transfer]




FAD_B_10(2GH5)
GSHR_HUMAN
[Raw transfer]




FAD_B_7(4J57)
TRXR2_PLAF7
[Raw transfer]




ELI_B_8(2GH5)
GSHR_HUMAN
[Raw transfer]




FAD_C_3(4GRT)
GSHR_HUMAN
[Raw transfer]




FAD_A_2(3H4K)
?
[Raw transfer]




FAD_C_3(1ZDL)
TRXR2_MOUSE
[Raw transfer]




FAD_A_3(4LA1)
?
[Raw transfer]




FAD_B_4(4LA1)
?
[Raw transfer]




ACM_G_7(1GRF)
GSHR_HUMAN
[Raw transfer]




AJ3_A_4(1BWC)
GSHR_HUMAN
[Raw transfer]




TS4_E_5(5GRT)
GSHR_HUMAN
[Raw transfer]




1 PsiBlast_PDB 97.8869% -99 - C2 -1GER 10.6 GSHR_ECOLI
2 PsiBlast_PDB 95.3269% -97 - C2 -1GET 10.0 GSHR_ECOLI
22 PsiBlast_CBE 94.9469% -95 - C2 -1GER 11.0 GSHR_ECOLI
23 PsiBlast_CBE 94.3067% -96 - C2 -1GEU 10.4 GSHR_ECOLI
24 PsiBlast_CBE 94.2767% -97 - C2 -1GES 10.9 GSHR_ECOLI
101 HHSearch 93.7668% -98 - C2 -1GES 11.2 GSHR_ECOLI
3 PsiBlast_PDB 93.4567% -98 - C2 -1GES 11.2 GSHR_ECOLI
21 PsiBlast_CBE 93.4069% -96 - C2 -1GET 10.7 GSHR_ECOLI
4 PsiBlast_PDB 92.7367% -97 - C2 -1GEU 10.6 GSHR_ECOLI
10 PsiBlast_PDB 92.0654%-102 - C2 -1BWC 11.0 GSHR_HUMAN
20 PsiBlast_PDB 91.2654% -97 - C2 -3DK8 12.0 GSHR_HUMAN
19 PsiBlast_PDB 91.1554%-100 - C2 -3DK4 11.9 GSHR_HUMAN
26 PsiBlast_CBE 90.5954% -95 - C2 -3SQP 11.6 GSHR_HUMAN
27 PsiBlast_CBE 90.5854% -96 - C2 -3DK9 11.8 GSHR_HUMAN
30 PsiBlast_CBE 90.4554% -99 - C2 -1XAN 12.2 GSHR_HUMAN
25 PsiBlast_CBE 90.4454% -95 - C2 -3SQP 11.6 GSHR_HUMAN
14 PsiBlast_PDB 90.0654% -98 - C2 -1GRE 11.1 GSHR_HUMAN
18 PsiBlast_PDB 89.9654% -97 - C2 -3DJJ 11.6 GSHR_HUMAN
15 PsiBlast_PDB 89.8654% -98 - C2 -1GRF 11.3 GSHR_HUMAN
12 PsiBlast_PDB 89.8254%-100 - C2 -1GRA 11.5 GSHR_HUMAN
28 PsiBlast_CBE 89.7554% -97 - C2 -3DJG 11.8 GSHR_HUMAN
31 PsiBlast_CBE 89.6454% -97 - C2 -2AAQ 11.0 GSHR_HUMAN
11 PsiBlast_PDB 89.4954% -98 - C2 -2GH5 12.1 GSHR_HUMAN
8 PsiBlast_PDB 89.4553% -99 - C2 -5GRT 1.8 GSHR_HUMAN
29 PsiBlast_CBE 89.3854% -98 - C2 -2GH5 12.1 GSHR_HUMAN
13 PsiBlast_PDB 89.3254% -98 - C2 -1GRB 10.8 GSHR_HUMAN
16 PsiBlast_PDB 89.2954% -98 - C2 -3GRS 11.5 GSHR_HUMAN
17 PsiBlast_PDB 89.2854% -98 - C2 -4GR1 11.6 GSHR_HUMAN
5 PsiBlast_PDB 88.8353% -98 - C2 -2GRT 11.0 GSHR_HUMAN
6 PsiBlast_PDB 88.6353% -98 - C2 -3GRT 10.3 GSHR_HUMAN
9 PsiBlast_PDB 87.7853% -97 - C2 -1GRT 11.3 GSHR_HUMAN
7 PsiBlast_PDB 87.7153%-100 - C2 -4GRT 8.6 GSHR_HUMAN
114 HHSearch 87.1555% -91 - C2 -3DK9 11.8 GSHR_HUMAN
123 Fugue 87.0863% -97 - C2 -1GER 9.0 GSHR_ECOLI
120 HHSearch 82.6351% -89 - C2 -2R9Z 11.8 GASHR_MARGR
32 PsiBlast_CBE 82.3851% -87 - C2 -2R9Z 11.1 GASHR_MARGR
33 PsiBlast_CBE 80.8051% -86 - C2 -2R9Z 11.8 GASHR_MARGR
41 PsiBlast_CBE 79.7138% -97 - C2 -2X8G 12.7 ?
40 PsiBlast_CBE 79.3638% -97 - C2 -2X8H 12.8 ?
43 PsiBlast_CBE 79.2738% -98 - C2 -2X8C 12.5 ?
45 PsiBlast_CBE 79.1438% -96 - C2 -2V6O 12.7 ?
49 PsiBlast_CBE 79.1038% -96 - C2 -3DGH 12.8 TRXR1_DROME
48 PsiBlast_CBE 78.7938% -96 - C2 -3DGH 12.6 TRXR1_DROME
44 PsiBlast_CBE 78.6838% -96 - C2 -3H4K 12.1 ?
105 HHSearch 78.3038% -95 - C2 -3O0H 11.3 ?
39 PsiBlast_CBE 78.2738% -94 - C2 -2X99 12.4 ?
38 PsiBlast_CBE 78.2038% -97 - C2 -3O0H 11.3 ?
103 HHSearch 77.9446% -92 - C2 -1ONF 10.0 GSHR_PLAFK
35 PsiBlast_CBE 77.4839% -91 - C2 -1ZKQ 10.8 TRXR2_MOUSE
51 PsiBlast_CBE 77.3336% -98 - C2 -4J57 12.5 TRXR2_PLAF7
50 PsiBlast_CBE 77.1538% -96 - C2 -2NVK 13.1 TRXR1_DROME
52 PsiBlast_CBE 77.0036% -98 - C2 -4J57 12.1 TRXR2_PLAF7
122 Fugue 76.6539% -91 - C2 -3H4K 12.1 ?
46 PsiBlast_CBE 76.3938% -95 - C2 -3DH9 12.7 TRXR1_DROME
34 PsiBlast_CBE 75.9041% -90 - C2 -1ONF 9.7 GSHR_PLAFK
42 PsiBlast_CBE 75.4538% -93 - C2 -2X8C 12.7 ?
59 PsiBlast_CBE 75.3636% -93 - C2 -2WBA 12.9 TYTR_TRYBB
58 PsiBlast_CBE 74.9536% -99 - C2 -4B1B 11.7 TRXR_PLAF5
47 PsiBlast_CBE 74.7338% -96 - C2 -3DH9 13.1 TRXR1_DROME
60 PsiBlast_CBE 74.6136% -91 - C2 -2WBA 12.8 TYTR_TRYBB
61 PsiBlast_CBE 74.5936% -93 - C2 -4NEV 12.8 ?
36 PsiBlast_CBE 74.3739% -88 - C2 -1ZDL 11.3 TRXR2_MOUSE
98 PsiBlast_CBE 74.2036% -94 - C2 -4APN 12.2 ?
111 HHSearch 73.9736% -91 - C2 -1FEC 13.1 TYTR_CRIFA
99 PsiBlast_CBE 73.6036% -94 - C2 -4ADW 11.6 ?
100 PsiBlast_CBE 73.1236% -94 - C2 -4ADW 11.7 ?
97 PsiBlast_CBE 72.2636% -91 - C2 -4APN 12.3 ?
57 PsiBlast_CBE 72.0936% -98 - C2 -4B1B 9.6 TRXR_PLAF5
62 PsiBlast_CBE 71.5536% -92 - C2 -4NEV 13.2 ?
96 PsiBlast_CBE 70.4438% -96 - C2 -4LA1 10.6 ?
95 PsiBlast_CBE 69.0738% -94 - C2 -4LA1 10.6 ?