@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0917: (2016-03-19 )
MFENYQFPKDFLWGGAIAANQAEGAFKVDGKGISLADLHKYHKGKTNDEISEEQHKGVSLADIKASIEDKINYYPKRHGIDFYHTYPEDLELLAEMGFKTFRTSLDWTRIFPTGEETEPNEAGLKYYDQLIDKIIELGMEPIITILHYETPVEIVLNHGGWHNRKVIDLFEKYGKTVLDRYNKKVKYWIVINQINLIQFEPFNSTAIPYDAVDDYLSATYQAVHNQFVASAKIYEYGKALNPDLMIGTMLADCTAYPFSCDPDDIVLAMKRNRMEYFFADVQFQGEYPQYALNYFEENNIHIEITEEDKAILQKNTMDYLALSYYYSQMVDSKRNDLDPASITPNPHLKANPWGWAVDPKGLYNALSQYWDRYHKPIIIAENGFGMYDKLENGEIHDDYRIDYLSAHLKEMKRAMYGGVEIIAYCAWGPIDIVSCSSAQMEKRYGFIYVDLDNEGNGTGKRIKKDSFSWYKKVIESNGEDLEA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6GB_B_5(4GPN)
?
[Raw transfer]




6GB_A_3(4GPN)
?
[Raw transfer]




P53_A_2(4F79)
?
[Raw transfer]




BG6_A_3(4F66)
?
[Raw transfer]




BG6_B_7(4F66)
?
[Raw transfer]




1FT_B_3(4IPN)
?
[Raw transfer]




1FT_E_4(4IPN)
?
[Raw transfer]




GOL_A_3(4IPL)
?
[Raw transfer]




8 PsiBlast_PDB 94.6244% -84 - C1 -3QOM - ? -
9 PsiBlast_PDB 94.3144% -83 - C1 -4GZE - ? -
22 PsiBlast_CBE 93.9946% -85 - C1 -4GPN 5.9 ?
24 PsiBlast_CBE 93.4744% -82 - C1 -2XHY - BGLA_ECOLI -
1 PsiBlast_PDB 93.4347% -81 - C1 -4F66 5.1 ?
21 PsiBlast_CBE 92.8147% -80 - C1 -4F66 4.6 ?
3 PsiBlast_PDB 92.5746% -82 - C1 -4GPN 5.1 ?
25 PsiBlast_CBE 92.0844% -82 - C1 -2XHY - BGLA_ECOLI -
4 PsiBlast_PDB 92.0546% -78 - C1 -3PN8 - ? -
23 PsiBlast_CBE 91.9744% -83 - C1 -2XHY - BGLA_ECOLI -
2 PsiBlast_PDB 91.6846% -82 - C1 -4F79 5.8 ?
5 PsiBlast_PDB 91.4744% -82 - C1 -2XHY - BGLA_ECOLI -
7 PsiBlast_PDB 90.2243% -88 - C1 -4IPN 3.5 ?
6 PsiBlast_PDB 89.8543% -85 - C1 -4IPL 2.7 ?
44 HHSearch 89.5945% -78 - C1 -2XHY - BGLA_ECOLI -
26 PsiBlast_CBE 88.8543% -83 - C1 -4IPN 3.5 ?
28 PsiBlast_CBE 80.7731% -80 - C1 -4PTW - ? -
31 Fugue 80.4032% -85 - C1 -1QOX - BGLA_BACCI -
29 PsiBlast_CBE 79.6231% -79 - C1 -4PTV - ? -
27 PsiBlast_CBE 79.0631% -77 - C1 -4PTX - ? -