@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1016: (2016-03-20 )
LLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITGIDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLEVNDGVDPEEAAKKWIKNNPDKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVATDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BET_B_2(2B4L)
OPUAC_BACSU
[Raw transfer]



BET_B_2(2B4L)
OPUAC_BACSU
[Raw transfer]



BET_B_2(2B4L)
OPUAC_BACSU
[Raw transfer]



313_C_7(3CHG)
OPUAC_BACSU
[Raw transfer]



PBE_D_4(2B4M)
OPUAC_BACSU
[Raw transfer]



313_D_5(3CHG)
OPUAC_BACSU
[Raw transfer]



313_A_8(3CHG)
OPUAC_BACSU
[Raw transfer]



PBE_C_3(2B4M)
OPUAC_BACSU
[Raw transfer]



313_B_6(3CHG)
OPUAC_BACSU
[Raw transfer]



BET_A_2(3L6H)
?
[Raw transfer]



BET_A_5(3TMG)
?
[Raw transfer]
1 PsiBlast_PDB 99.1851% -88 - C5 -2B4L 3.9 OPUAC_BACSU
51 Fugue 99.1551% -87 - C5 -2B4L 3.9 OPUAC_BACSU
24 PsiBlast_CBE 98.0951% -90 - C5 -2B4M 4.0 OPUAC_BACSU
31 HHSearch 97.9051% -84 * C5 *2B4L 3.9 OPUAC_BACSU
2 PsiBlast_PDB 97.9051% -88 - C5 -2B4M 4.3 OPUAC_BACSU
23 PsiBlast_CBE 96.9551% -91 - C5 -3CHG 4.0 OPUAC_BACSU
22 PsiBlast_CBE 96.2251% -82 - C5 -3CHG 3.1 OPUAC_BACSU
21 PsiBlast_CBE 95.3951% -87 - C5 -3CHG 3.7 OPUAC_BACSU
3 PsiBlast_PDB 94.3651% -84 - C5 -3CHG 3.4 OPUAC_BACSU
5 PsiBlast_PDB 73.9553% -89 - C5 -3L6H 2.3 ?
4 PsiBlast_PDB 70.5953% -81 - C5 -3L6G - ? -
52 Fugue 63.9620% -64 - C5 -1R9L - PROX_ECOLI -
9 PsiBlast_PDB 63.4130% -67 - C5 -2RF1 - ? -
7 PsiBlast_PDB 63.0330% -65 - C5 -2REG - ? -
26 PsiBlast_CBE 62.0935% -72 - C5 -3TMG - ? -
25 PsiBlast_CBE 61.9335% -75 - C5 -3TMG - ? -
6 PsiBlast_PDB 60.9935% -68 - C5 -3TMG - ? -
27 PsiBlast_CBE 60.9635% -65 - C5 -3TMG - ? -
10 PsiBlast_PDB 60.6630% -55 - C5 -2RIN - ? -
32 HHSearch 59.2833% -59 - C5 -3TMG 3.0 ?