@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1023: (2016-03-20 )
MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFLGKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKIQ

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_D_8(4J91)
KTRA_BACSU
[Raw transfer]




ATP_A_3(4J90)
KTRA_BACSU
[Raw transfer]




ATP_B_4(4J90)
KTRA_BACSU
[Raw transfer]




NAI_L_12(2HMS)
KTRA_BACSU
[Raw transfer]




ADP_D_8(4J91)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMW)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




ATP_B_4(4J90)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMS)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMW)
KTRA_BACSU
[Raw transfer]




NAI_L_12(2HMS)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMT)
KTRA_BACSU
[Raw transfer]




NAI_K_11(2HMS)
KTRA_BACSU
[Raw transfer]




ADP_I_9(2HMV)
KTRA_BACSU
[Raw transfer]




NAI_J_10(2HMS)
KTRA_BACSU
[Raw transfer]




ADP_M_13(2HMV)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMT)
KTRA_BACSU
[Raw transfer]




NAI_M_13(2HMT)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




24 PsiBlast_CBE 96.2952%-131 - C3 -4J90 7.9 KTRA_BACSU
1 PsiBlast_PDB 96.2852%-130 * C3 *4J90 7.3 KTRA_BACSU
29 PsiBlast_CBE 95.9052%-131 - C3 -4J7C - KTRA_BACSU -
26 PsiBlast_CBE 95.8452%-134 - C3 -4J7C - KTRA_BACSU -
3 PsiBlast_PDB 95.7152%-133 - C3 -4J7C - KTRA_BACSU -
27 PsiBlast_CBE 95.5752%-129 - C3 -4J7C - KTRA_BACSU -
31 PsiBlast_CBE 95.3952%-130 - C3 -4J7C - KTRA_BACSU -
25 PsiBlast_CBE 95.3152%-131 - C3 -4J7C - KTRA_BACSU -
28 PsiBlast_CBE 95.2952%-132 - C3 -4J7C - KTRA_BACSU -
30 PsiBlast_CBE 95.1152%-130 - C3 -4J7C - KTRA_BACSU -
23 PsiBlast_CBE 94.9652%-131 - C3 -4J91 7.0 KTRA_BACSU
21 PsiBlast_CBE 94.9352%-132 - C3 -4J91 6.6 KTRA_BACSU
22 PsiBlast_CBE 93.2752%-137 - C3 -4J91 Error KTRA_BACSU
2 PsiBlast_PDB 91.4552%-141 - C3 -4J91 Error KTRA_BACSU
35 PsiBlast_CBE 80.8661%-138 - C3 -2HMT 5.4 KTRA_BACSU
7 PsiBlast_PDB 80.6461%-136 - C3 -2HMV 5.6 KTRA_BACSU
33 PsiBlast_CBE 80.5561%-143 - C3 -2HMV 5.9 KTRA_BACSU
8 PsiBlast_PDB 80.3961%-139 - C3 -2HMW Error KTRA_BACSU
34 PsiBlast_CBE 80.1061%-141 - C3 -2HMU 5.6 KTRA_BACSU
37 PsiBlast_CBE 80.0661%-137 - C3 -2HMS 6.3 KTRA_BACSU
5 PsiBlast_PDB 79.9461%-137 - C3 -2HMT 6.5 KTRA_BACSU
99 Fugue 79.8361%-129 - C3 -1LSU Error KTRA_BACSU
4 PsiBlast_PDB 79.7961%-134 - C3 -2HMS 6.6 KTRA_BACSU
32 PsiBlast_CBE 79.6461%-133 - C3 -2HMW 5.8 KTRA_BACSU
36 PsiBlast_CBE 79.6361%-137 - C3 -2HMS 5.8 KTRA_BACSU
38 PsiBlast_CBE 79.5061%-136 - C3 -2HMS 6.1 KTRA_BACSU
9 PsiBlast_PDB 79.2661%-137 - C3 -1LSU Error KTRA_BACSU
39 PsiBlast_CBE 79.1261%-133 - C3 -1LSU 5.2 KTRA_BACSU
86 HHSearch 79.0960%-127 - C3 -2HMT 6.5 KTRA_BACSU
6 PsiBlast_PDB 79.0561%-137 - C3 -2HMU Error KTRA_BACSU