@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1066: (2016-03-21 )
MDSEKIDYLARLWIMEAAAKIKQSFKETLDIDVKSGRNDLVTNMDKETEAFFVQQIKDHFPDHCLFGEEGMASDVTDLDGVVWILDPIDGTLNFVEQQRDFAISLAVYEDGIGRLAYIYDVTRDELYFGEKGKGATVNGRTIPKLDPAIDLKDTLLIANLSVTRKFPTMWEAVKVSRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVEELGGKVTRINGEKINMLEKGSSIVASPKIHQTLLDNYLP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IPD_A_4(1IMA)
IMPA1_HUMAN
[Raw transfer]



LIP_A_4(1IMB)
IMPA1_HUMAN
[Raw transfer]



IPD_A_12(1AWB)
IMPA1_HUMAN
[Raw transfer]



SRT_A_4(3RYD)
?
[Raw transfer]



SRT_C_11(3RYD)
?
[Raw transfer]



GOL_B_12(4PTK)
?
[Raw transfer]



GOL_B_10(4I3E)
?
[Raw transfer]



GOL_A_6(4I40)
?
[Raw transfer]



GOL_A_5(4I3E)
?
[Raw transfer]



GOL_A_5(4I3Y)
?
[Raw transfer]



GOL_B_13(4I3Y)
?
[Raw transfer]



GOL_B_12(4I40)
?
[Raw transfer]



GOL_A_7(4PTK)
?
[Raw transfer]



GOL_B_14(4G61)
?
[Raw transfer]



GOL_A_7(4G61)
?
[Raw transfer]



GD_A_3(1IMA)
IMPA1_HUMAN
[Raw transfer]



GD_A_5(2HHM)
IMPA1_HUMAN
[Raw transfer]



PG4_A_8(3T0J)
?
[Raw transfer]



PG4_A_8(3T0J)
?
[Raw transfer]
50 HHSearch 96.7738%-111 - C6 -3T0J 2.0 ?
1 PsiBlast_PDB 96.7138%-105 - C6 -3T0J 2.0 ?
23 PsiBlast_CBE 96.3738%-105 - C6 -3T0J - ? -
21 PsiBlast_CBE 94.8038%-104 - C6 -3T0J - ? -
22 PsiBlast_CBE 94.4038%-105 - C6 -3T0J - ? -
4 PsiBlast_PDB 94.1735% -96 - C6 -4G61 3.2 ?
26 PsiBlast_CBE 93.7535% -97 - C6 -4I40 3.2 ?
5 PsiBlast_PDB 93.6035% -97 - C6 -4I3Y 3.5 ?
6 PsiBlast_PDB 93.3835% -88 - C6 -4I40 3.1 ?
2 PsiBlast_PDB 92.9335% -99 - C6 -3QMF - ? -
27 PsiBlast_CBE 92.8635% -95 - C6 -4I3Y 2.3 ?
28 PsiBlast_CBE 92.8235% -91 - C6 -4I3E 2.9 ?
8 PsiBlast_PDB 92.7035% -89 - C6 -4PTK 3.4 ?
3 PsiBlast_PDB 92.1635% -92 - C6 -3RYD 3.6 ?
25 PsiBlast_CBE 92.1035% -94 - C6 -4PTK 2.4 ?
29 PsiBlast_CBE 90.9835% -95 - C6 -4G61 3.3 ?
7 PsiBlast_PDB 90.7035% -97 - C6 -4I3E 3.0 ?
24 PsiBlast_CBE 89.6235% -95 - C6 -3RYD 2.9 ?
54 HHSearch 87.5231% -85 - C6 -2QFL - SUHB_ECOLI -
56 HHSearch 86.1829% -85 - C6 -2BJI - IMPA1_BOVIN -