@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1089: (2016-03-21 )
MKKVITYGTFDLLHWGHIHLLKRAKALGDYLIVAISSDEFNRIKHKEAYHSYEHRKLIIEAIRYVDEVIPENNWEQKRDDIEKYGIDVFVMGDDWEGEFDFLKDVCEVVYLPRTEGISTSQIKDELK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




CTP_D_4(1COZ)
TAGD_BACSU
[Raw transfer]




C2G_H_8(1N1D)
TAGD_BACSU
[Raw transfer]




CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




C2G_J_10(1N1D)
TAGD_BACSU
[Raw transfer]




C2G_I_9(1N1D)
TAGD_BACSU
[Raw transfer]




C2G_K_11(1N1D)
TAGD_BACSU
[Raw transfer]




CTP_C_3(1COZ)
TAGD_BACSU
[Raw transfer]




99 Fugue 89.9280%-112 - C1 -1COZ 7.2 TAGD_BACSU
79 HHSearch 89.9280%-112 - C1 -1COZ 7.2 TAGD_BACSU
23 PsiBlast_CBE 89.8080%-116 - C1 -1N1D 7.3 TAGD_BACSU
1 PsiBlast_PDB 89.2980%-112 - C1 -1COZ 7.2 TAGD_BACSU
24 PsiBlast_CBE 88.6080%-112 - C1 -1COZ 7.2 TAGD_BACSU
21 PsiBlast_CBE 88.5480%-108 - C1 -1N1D 7.1 TAGD_BACSU
2 PsiBlast_PDB 88.3980%-110 - C1 -1N1D 7.4 TAGD_BACSU
22 PsiBlast_CBE 87.8080%-110 - C1 -1N1D 7.6 TAGD_BACSU
100 Fugue 85.5376%-109 - C1 -1COZ 5.3 TAGD_BACSU
78 HHSearch 78.9271%-117 - C1 -2B7L - ? -
3 PsiBlast_PDB 78.6371%-117 - C1 -2B7L - ? -
80 HHSearch 66.9231%-104 - C1 -3ELB - PCY2_HUMAN -
6 PsiBlast_PDB 64.8236%-117 - C1 -4MVC - PCY1A_RAT -
25 PsiBlast_CBE 64.2836%-117 - C1 -3HL4 - PCY1A_RAT -
26 PsiBlast_CBE 61.9036%-124 - C1 -4MVC - PCY1A_RAT -
5 PsiBlast_PDB 61.4236%-117 - C1 -3HL4 - PCY1A_RAT -
30 PsiBlast_CBE 61.0336%-117 - C1 -4MVD - PCY1A_RAT -
33 PsiBlast_CBE 61.0236%-118 - C1 -4MVD - PCY1A_RAT -
7 PsiBlast_PDB 60.6736%-121 - C1 -4MVD - PCY1A_RAT -
28 PsiBlast_CBE 60.5636%-118 - C1 -4MVD - PCY1A_RAT -