Study : Lmo1147 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C2_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C2_S1
Complex: 5GP_A_7(1C9K) / Model_2(1C9K/A) = [4.1] Download1221.556.38MSEMMLVTGGARSGKSSFAEREAAKYDRVLYVATGIAFEKDTEFQARIKKHQATRPANWDTFEAFQGIASYLDQHSTQYDVMMLDCVTMLVTNLFFTLLGERELTNEIADEVEAGIQAEVSAILEAGKASQAKLIFVTNEIGLGVVPENKLTRVFRDIIGRVNQQIATQVEEVYLVVSGIPKRWK
Complex: 5GP_A_7(1C9K) / Model_25(1C9K/A) = [4.2] Download1352.006.76MSEMMLVTGGARSGKSSFAEREAAKYDRVLYVATGIAFEKDTEFQARIKKHQATRPANWDTFEAFQGIASYLDQHSTQYDVMMLDCVTMLVTNLFFTLLGERELTNEIADEVEAGIQAEVSAILEAGKASQAKLIFVTNEIGLGVVPENKLTRVFRDIIGRVNQQIATQVEEVYLVVSGIPKRWK
Complex: 5GP_C_10(1C9K) / Model_23(1C9K/C) = [4.2] Download923.2215.18MSEMMLVTGGARSGKSSFAEREAAKYDRVLYVATGIAFEKDTEFQARIKKHQATRPANWDTFEAFQGIASYLDQHSTQYDVMMLDCVTMLVTNLFFTLLGERELTNEIADEVEAGIQAEVSAILEAGKASQAKLIFVTNEIGLGVVPENKLTRVFRDIIGRVNQQIATQVEEVYLVVSGIPKRWK
Complex: 5GP_B_8(1C9K) / Model_24(1C9K/B) = [5.2] Download1052.906.14MSEMMLVTGGARSGKSSFAEREAAKYDRVLYVATGIAFEKDTEFQARIKKHQATRPANWDTFEAFQGIASYLDQHSTQYDVMMLDCVTMLVTNLFFTLLGERELTNEIADEVEAGIQAEVSAILEAGKASQAKLIFVTNEIGLGVVPENKLTRVFRDIIGRVNQQIATQVEEVYLVVSGIPKRWK
Consensus
[pKd Mean = 4.42]
-1137
(s=162)
8
(s=3)
MSEMMLVTGGARSGKSSFAEREAAKYDRVLYVATGIAFEKDTEFQARIKKHQATRPANWDTFEAFQGIASYLDQHSTQYDVMMLDCVTMLVTNLFFTLLGERELTNEIADEVEAGIQAEVSAILEAGKASQAKLIFVTNEIGLGVVPENKLTRVFRDIIGRVNQQIATQVEEVYLVVSGIPKRWK