Study : Lmo1164 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C6_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C6_S1
Complex: ATP_B_6(2ZHZ) / Model_26(2ZHZ/B) = [3.8] Download1839.3016.37VSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG
Complex: B12_A_4(3CI1) / Model_7(3CI1/A) = [3.9] Download2547.7727.46VSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG
Complex: CBY_A_5(3CI4) / Model_9(3CI4/A) = [3.9] Download2622.2626.36VSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG
Complex: ATP_A_4(3KE5) / Model_2(3KE5/A) = [4.1] Download1579.1121.24VSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG
Complex: ATP_A_7(2R6T) / Model_10(2R6T/A) = [4.3] Download1560.1024.60VSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG
Consensus
[pKd Mean = 4.00]
-2029
(s=464)
23
(s=4)
VSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG