@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1164: (2016-03-22 )
VSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DIO_B_6(3KE4)
?
[Raw transfer]



ATP_A_7(2R6X)
?
[Raw transfer]



ATP_B_8(2R6T)
?
[Raw transfer]



ATP_B_8(2R6X)
?
[Raw transfer]



ATP_A_7(2R6T)
?
[Raw transfer]



ATP_B_6(3KE5)
?
[Raw transfer]



ATP_A_4(3KE5)
?
[Raw transfer]



ATP_A_2(3GAH)
?
[Raw transfer]



ATP_A_2(3GAJ)
?
[Raw transfer]



ATP_A_4(2NT8)
?
[Raw transfer]



ATP_A_4(2NT8)
?
[Raw transfer]



ATP_C_8(3KE5)
?
[Raw transfer]



ATP_B_7(2ZHZ)
?
[Raw transfer]



ATP_B_6(2ZHZ)
?
[Raw transfer]



3PO_A_4(3CI3)
?
[Raw transfer]



3PO_A_4(3CI3)
?
[Raw transfer]



ATP_B_13(2IDX)
MMAB_HUMAN
[Raw transfer]



CBY_A_5(3CI4)
?
[Raw transfer]



B12_A_4(3CI1)
?
[Raw transfer]



ATP_A_12(2IDX)
MMAB_HUMAN
[Raw transfer]



DIO_A_5(3KE4)
?
[Raw transfer]



DIO_A_5(3KE4)
?
[Raw transfer]



DIO_B_7(3KE4)
?
[Raw transfer]
56 HHSearch 86.2740% -62 - C6 -3KE4 2.9 ?
22 PsiBlast_CBE 84.2541% -79 - C6 -3KE5 4.6 ?
13 PsiBlast_PDB 84.1735% -68 - C6 -3GAH 5.0 ?
30 PsiBlast_CBE 83.3237% -63 - C6 -2IDX 4.4 MMAB_HUMAN
21 PsiBlast_CBE 83.2841% -85 - C6 -3KE5 4.6 ?
2 PsiBlast_PDB 83.2241% -81 - C6 -3KE5 4.1 ?
10 PsiBlast_PDB 82.8435% -65 - C6 -2R6T 4.3 ?
6 PsiBlast_PDB 82.6836% -68 - C6 -3GAJ 5.2 ?
23 PsiBlast_CBE 82.5541% -84 - C6 -3KE4 2.9 ?
26 PsiBlast_CBE 82.5236% -67 - C6 -2ZHZ 3.8 ?
8 PsiBlast_PDB 82.5236% -67 - C6 -3CI3 2.6 ?
5 PsiBlast_PDB 82.5236% -66 - C6 -2NT8 5.4 ?
1 PsiBlast_PDB 82.3341% -82 - C6 -3KE4 2.9 ?
25 PsiBlast_CBE 81.9936% -68 - C6 -2ZHZ 4.4 ?
14 PsiBlast_PDB 81.8735% -66 - C6 -3GAI - ? -
24 PsiBlast_CBE 81.4341% -81 - C6 -3KE4 Error ?
3 PsiBlast_PDB 81.0036% -76 - C6 -2ZHY - ? -
7 PsiBlast_PDB 80.9836% -68 - C6 -3CI1 3.9 ?
9 PsiBlast_PDB 80.8336% -70 - C6 -3CI4 3.9 ?
58 HHSearch 80.6539% -66 - C6 -2G2D - PDUO_MYCTU -
29 PsiBlast_CBE 80.5337% -66 - C6 -2IDX 4.3 MMAB_HUMAN
28 PsiBlast_CBE 80.1435% -76 - C6 -2R6X 5.3 ?
55 HHSearch 80.1035% -55 - C6 -3CI3 2.6 ?
27 PsiBlast_CBE 79.8135% -78 - C6 -2R6T 4.7 ?
61 HHSearch 79.7135% -55 - C6 -2NT8 5.4 ?
11 PsiBlast_PDB 77.8035% -70 - C6 -2R6X 4.9 ?