Study : Lmo1209 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C6_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C6_S1
Complex: ATP_B_6(2ZHZ) / Model_28(2ZHZ/B) = [3.9] Download1565.426.62MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
Complex: ATP_A_4(3KE5) / Model_3(3KE5/A) = [4.2] Download1268.6510.26MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
Complex: ATP_A_7(2R6T) / Model_8(2R6T/A) = [4.3] Download1494.3610.26MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
Complex: ATP_B_7(2ZHZ) / Model_27(2ZHZ/C) = [4.3] Download1576.016.62MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
Complex: B12_A_4(3CI1) / Model_4(3CI1/A) = [4.3] Download2587.988.04MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
Consensus
[pKd Mean = 4.20]
-1698
(s=458)
8
(s=1)
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK