@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1233: (2016-03-22 )
MVKEITDATFEQETSEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_D_12(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_9(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_A_9(2TRX)
THIO_ECOLI
[Raw transfer]




133 HHSearch 90.9764%-114 - C1 -2VOC - THIO_BACSU -
4 PsiBlast_PDB 90.3467%-121 - C1 -2VOC - THIO_BACSU -
2 PsiBlast_PDB 87.7567%-105 - C1 -2GZZ - THIO_BACSU -
3 PsiBlast_PDB 86.6166%-114 - C1 -2IPA - THIO_BACSU -
1 PsiBlast_PDB 86.2067%-102 - C1 -2GZY - THIO_BACSU -
21 PsiBlast_CBE 86.1955%-104 - C1 -4BA7 - ? -
14 PsiBlast_PDB 85.5050%-120 - C1 -3ZIV - ? -
132 HHSearch 84.1654%-108 - C1 -2YJ7 - ? -
32 PsiBlast_CBE 83.7252%-106 - C1 -2YJ7 - ? -
24 PsiBlast_CBE 83.2755%-104 - C1 -1NW2 - THIO_ALIAC -
125 HHSearch 82.0149%-102 - C1 -1T00 - THIO1_STRCO -
15 PsiBlast_PDB 82.0149%-105 - C1 -2O89 - THIO_STAAU -
35 PsiBlast_CBE 81.9554% -99 - C1 -3O6T - THIO_MYCTU -
136 HHSearch 81.9051% -92 - C1 -1NSW - THIO_ALIAC -
40 PsiBlast_CBE 81.8752%-102 - C1 -4ULX - ? -
7 PsiBlast_PDB 81.7750%-112 - C1 -2O87 - THIO_STAAU -
39 PsiBlast_CBE 81.6748%-109 - C1 -4TN8 - ? -
36 PsiBlast_CBE 81.5454%-110 - C1 -3O6T - THIO_MYCTU -
37 PsiBlast_CBE 81.4454%-104 - C1 -3NOF - ? -
13 PsiBlast_PDB 81.3356%-106 - C1 -4WXT - ? -
47 PsiBlast_CBE 79.1243%-109 - C1 -2FCH 3.5 THIO_ECOLI
57 PsiBlast_CBE 77.2742%-113 - C1 -2TRX 2.9 THIO_ECOLI
111 Fugue 74.7140%-126 - C1 -2TRX 2.9 THIO_ECOLI