@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1314: (2016-03-23 )
MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_B_2(1DD5)
RRF_THEMA
[Raw transfer]




ACY_B_2(1DD5)
RRF_THEMA
[Raw transfer]




ACY_B_2(1DD5)
RRF_THEMA
[Raw transfer]




1 PsiBlast_PDB 89.8265% -80 - C3 -4GFQ - RRF_BACAN -
3 PsiBlast_PDB 82.1451% -75 - C3 -1WQG - RRF_MYCTU -
23 HHSearch 82.0250% -69 - C3 -1IS1 - RRF_VIBPA -
10 PsiBlast_PDB 82.0250% -69 - C3 -1IS1 - RRF_VIBPA -
2 PsiBlast_PDB 81.9351% -73 - C3 -1WQF - RRF_MYCTU -
6 PsiBlast_PDB 81.8751% -73 - C3 -4KB2 - RRF_MYCTU -
5 PsiBlast_PDB 81.8751% -74 - C3 -4KDD - RRF_MYCTU -
8 PsiBlast_PDB 80.4051% -74 - C3 -4KAW - RRF_MYCTU -
7 PsiBlast_PDB 80.3351% -70 - C3 -4KB4 - RRF_MYCTU -
25 HHSearch 78.7846% -72 - C3 -1EH1 - RRF_THET8 -
42 Fugue 78.3548% -75 - C3 -1EK8 - RRF_ECOLI -
24 HHSearch 78.2048% -65 - C3 -1ISE - RRF_ECOLI -
15 PsiBlast_PDB 78.0946% -76 - C3 -1EH1 - RRF_THET8 -
9 PsiBlast_PDB 77.7651% -66 - C3 -4KC6 - RRF_MYCTU -
4 PsiBlast_PDB 77.4251% -64 - C3 -1WQH - RRF_MYCTU -
26 HHSearch 77.0645% -70 - C3 -1DD5 3.2 RRF_THEMA
16 PsiBlast_PDB 76.9646% -74 - C3 -3J0D - RRF_THET8 -
41 Fugue 76.7544% -70 - C3 -1DD5 3.2 RRF_THEMA
18 PsiBlast_PDB 76.7544% -70 - C3 -1DD5 3.2 RRF_THEMA
11 PsiBlast_PDB 76.3350% -82 - C3 -1EK8 - RRF_ECOLI -