@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1317: (2016-03-23 )
MKKIILLGATGSIGTQTLAIIRENPEKFQVVALSFGRNMERGRAIIKEFKPKMVAVWHTRDRVTLEAEFPNVKFFNGLEGLREVATYLDGDVLLNAVMGSVGLLPTLDAIEAGKAIAIANKETLVTAGHLVMRAAKEKNISLLPVDSEHSAILQALNGENTERIEKIILTASGGSFRDKTREQLSAVTVKEALKHPNWNMGNKLTIDSATMFNKGLEVMEAHWLFGVDYDDIEVVIQRESIIHSMVQFVDGSFIAQLGTPDMRMPIQYALTYPDRLYIPYEKEFRITDFSALHFEKVDYERFPALKLAYNAGKIGGTMPTVLNAANEIAVAGFLNGQVAFYNIEALVENAMNRHTSISNPDLDTILQVDQETRAYVKTLL

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DXP_A_3(1Q0Q)
DXR_ECOLI
[Raw transfer]




DXP_B_4(1Q0Q)
DXR_ECOLI
[Raw transfer]




1UQ_A_5(4KP7)
DXR_PLAFX
[Raw transfer]




RF7_A_3(4Y6R)
DXR_PLAF7
[Raw transfer]




48S_B_6(4Y6S)
DXR_PLAF7
[Raw transfer]




RF7_B_6(4Y6R)
DXR_PLAF7
[Raw transfer]




RC5_B_5(4Y67)
DXR_PLAF7
[Raw transfer]




RC5_A_3(4Y67)
DXR_PLAF7
[Raw transfer]




R77_B_5(4Y6P)
DXR_PLAF7
[Raw transfer]




1UQ_B_7(4KP7)
DXR_PLAFX
[Raw transfer]




LSX_A_5(3WQR)
DXR_PLAFX
[Raw transfer]




R77_A_3(4Y6P)
DXR_PLAF7
[Raw transfer]




LSX_B_10(3WQR)
DXR_PLAFX
[Raw transfer]




48S_A_4(4Y6S)
DXR_PLAF7
[Raw transfer]




IB3_A_5(3WQQ)
DXR_PLAFX
[Raw transfer]




FOB_B_11(4GAE)
DXR_PLAFX
[Raw transfer]




FOB_A_4(4GAE)
DXR_PLAFX
[Raw transfer]




IB3_B_10(3WQQ)
DXR_PLAFX
[Raw transfer]




C0K_A_4(3R0I)
DXR_ECOLI
[Raw transfer]




F98_B_8(3AUA)
DXR_PLAFX
[Raw transfer]




FOM_B_8(3AU9)
DXR_PLAFX
[Raw transfer]




CBQ_A_6(1T1S)
DXR_ECOLI
[Raw transfer]




C0K_B_6(3R0I)
DXR_ECOLI
[Raw transfer]




FM7_A_3(3ZHZ)
DXR_MYCTU
[Raw transfer]




FM5_A_3(2Y1G)
DXR_MYCTU
[Raw transfer]




FOM_A_5(2EGH)
DXR_ECOLI
[Raw transfer]




IMB_E_5(1T1R)
DXR_ECOLI
[Raw transfer]




FOM_A_5(1ONP)
DXR_ECOLI
[Raw transfer]




FM6_A_4(3ZHX)
DXR_MYCTU
[Raw transfer]




FM8_A_3(3ZI0)
DXR_MYCTU
[Raw transfer]




FOM_B_6(1ONP)
DXR_ECOLI
[Raw transfer]




34F_A_3(2Y1D)
DXR_MYCTU
[Raw transfer]




CBQ_B_7(1T1S)
DXR_ECOLI
[Raw transfer]




IMB_F_6(1T1R)
DXR_ECOLI
[Raw transfer]




FOM_C_3(1Q0L)
DXR_ECOLI
[Raw transfer]




NDP_A_3(3AU9)
DXR_PLAFX
[Raw transfer]




NDP_A_3(3AUA)
DXR_PLAFX
[Raw transfer]




NDP_A_4(4AIC)
DXR_MYCTU
[Raw transfer]




NDP_B_2(3WQS)
DXR_PLAFX
[Raw transfer]




NDP_A_5(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_E_5(1Q0L)
DXR_ECOLI
[Raw transfer]




NDP_A_5(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_B_6(4OOF)
DXR_MYCTU
[Raw transfer]




DE2_A_5(4RCV)
?
[Raw transfer]




NDP_B_6(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_A_4(2Y1F)
DXR_MYCTU
[Raw transfer]




NDP_A_5(4A03)
DXR_MYCTU
[Raw transfer]




NDP_A_5(3ZHY)
DXR_MYCTU
[Raw transfer]




NDP_A_3(3A06)
DXR_THEMA
[Raw transfer]




NDP_A_4(2JCV)
DXR_MYCTU
[Raw transfer]




NDP_B_9(4A03)
DXR_MYCTU
[Raw transfer]




NDP_A_4(4RCV)
?
[Raw transfer]




NDP_B_8(3ZHY)
DXR_MYCTU
[Raw transfer]




NDP_B_8(2EGH)
DXR_ECOLI
[Raw transfer]




NDP_A_3(3RAS)
DXR_MYCTU
[Raw transfer]




NDP_B_6(3ANM)
DXR_ECOLI
[Raw transfer]




NDP_B_9(4AIC)
DXR_MYCTU
[Raw transfer]




NDP_A_4(2JCX)
DXR_MYCTU
[Raw transfer]




NDP_A_3(2JD1)
DXR_MYCTU
[Raw transfer]




NDP_A_3(2JD0)
DXR_MYCTU
[Raw transfer]




NDP_B_5(3ANL)
DXR_ECOLI
[Raw transfer]




NDP_A_3(3ANN)
DXR_ECOLI
[Raw transfer]




NDP_B_5(3ANN)
DXR_ECOLI
[Raw transfer]




NDP_B_6(3RAS)
DXR_MYCTU
[Raw transfer]




NDP_B_6(2JCV)
DXR_MYCTU
[Raw transfer]




NDP_B_6(2JCX)
DXR_MYCTU
[Raw transfer]




NDP_B_9(2Y1F)
DXR_MYCTU
[Raw transfer]




NDP_A_3(3ANL)
DXR_ECOLI
[Raw transfer]




NDP_B_8(4RCV)
?
[Raw transfer]




NDP_A_7(2EGH)
DXR_ECOLI
[Raw transfer]




NDP_A_4(3ANM)
DXR_ECOLI
[Raw transfer]




30 PsiBlast_CBE 94.0942%-104 - C2 -3R0I 3.4 DXR_ECOLI
10 PsiBlast_PDB 93.4142%-103 - C2 -3R0I 3.6 DXR_ECOLI
15 PsiBlast_PDB 93.2341% -95 - C2 -1T1R 3.4 DXR_ECOLI
101 HHSearch 93.2143% -94 - C2 -1Q0Q 10.2 DXR_ECOLI
16 PsiBlast_PDB 92.9541% -97 - C2 -1T1S 3.3 DXR_ECOLI
33 PsiBlast_CBE 92.9241% -97 - C2 -3ANL 10.4 DXR_ECOLI
13 PsiBlast_PDB 92.8541% -97 - C2 -3ANN 10.9 DXR_ECOLI
26 PsiBlast_CBE 92.8241%-103 - C2 -1R0K - DXR_ZYMMO -
36 PsiBlast_CBE 92.6841% -97 - C2 -1T1R 4.2 DXR_ECOLI
27 PsiBlast_CBE 92.6742% -97 - C2 -1Q0Q 10.7 DXR_ECOLI
32 PsiBlast_CBE 92.6341% -96 - C2 -3ANM 10.3 DXR_ECOLI
9 PsiBlast_PDB 92.5742% -96 - C2 -1Q0Q 10.2 DXR_ECOLI
34 PsiBlast_CBE 92.4741% -95 - C2 -2EGH 6.7 DXR_ECOLI
14 PsiBlast_PDB 92.4141% -97 - C2 -2EGH 7.8 DXR_ECOLI
11 PsiBlast_PDB 92.4041% -97 - C2 -3ANL 11.1 DXR_ECOLI
35 PsiBlast_CBE 92.3541% -96 - C2 -1T1S 3.2 DXR_ECOLI
25 PsiBlast_CBE 92.3141%-103 - C2 -1R0K - DXR_ZYMMO -
12 PsiBlast_PDB 92.2641% -96 - C2 -3ANM 11.0 DXR_ECOLI
5 PsiBlast_PDB 92.0942% -98 - C2 -1ONN - DXR_ECOLI -
6 PsiBlast_PDB 91.6442% -99 - C2 -1ONO - DXR_ECOLI -
7 PsiBlast_PDB 91.5542% -98 - C2 -1ONP 3.0 DXR_ECOLI
31 PsiBlast_CBE 91.4641% -97 - C2 -3ANN 10.2 DXR_ECOLI
8 PsiBlast_PDB 91.1942% -94 - C2 -1Q0L 10.9 DXR_ECOLI
28 PsiBlast_CBE 89.9342% -96 - C2 -1ONP 3.1 DXR_ECOLI
42 PsiBlast_CBE 88.7840%-102 - C2 -4Y67 7.1 DXR_PLAF7
41 PsiBlast_CBE 88.4540%-103 - C2 -4Y6P 6.9 DXR_PLAF7
39 PsiBlast_CBE 88.2640%-104 - C2 -4Y6S 6.7 DXR_PLAF7
38 PsiBlast_CBE 88.2040%-100 - C2 -4Y6S 6.8 DXR_PLAF7
20 PsiBlast_PDB 88.1940%-100 - C2 -4Y6R 6.2 DXR_PLAF7
55 PsiBlast_CBE 88.1540%-100 - C2 -4GAE 5.0 DXR_PLAFX
44 PsiBlast_CBE 88.0140%-101 - C2 -3WQR 5.1 DXR_PLAFX
40 PsiBlast_CBE 88.0040%-102 - C2 -4Y6R 7.0 DXR_PLAF7
54 PsiBlast_CBE 87.8740%-103 - C2 -4KP7 4.6 DXR_PLAFX
19 PsiBlast_PDB 87.8340% -99 - C2 -4Y6P 7.1 DXR_PLAF7
46 PsiBlast_CBE 87.6240%-102 - C2 -3WQQ 5.4 DXR_PLAFX
18 PsiBlast_PDB 87.3840%-103 - C2 -4Y67 6.8 DXR_PLAF7
50 PsiBlast_CBE 87.3240%-100 - C2 -3AU9 4.2 DXR_PLAFX
48 PsiBlast_CBE 87.3140%-100 - C2 -3AUA 4.0 DXR_PLAFX
51 PsiBlast_CBE 87.1340% -99 - C2 -3AU9 10.6 DXR_PLAFX
45 PsiBlast_CBE 87.0140% -97 - C2 -3WQR 5.5 DXR_PLAFX
56 PsiBlast_CBE 86.7340%-100 - C2 -4GAE 5.0 DXR_PLAFX
53 PsiBlast_CBE 86.5940%-104 - C2 -4KP7 4.3 DXR_PLAFX
49 PsiBlast_CBE 86.5840% -96 - C2 -3AUA 10.7 DXR_PLAFX
47 PsiBlast_CBE 86.4740% -98 - C2 -3WQQ 5.5 DXR_PLAFX
43 PsiBlast_CBE 86.4040% -98 - C2 -3WQS 11.6 DXR_PLAFX
104 HHSearch 83.5937% -96 - C2 -3A06 10.1 DXR_THEMA
95 PsiBlast_CBE 83.5142% -95 - C2 -2JCX 6.9 DXR_MYCTU
80 PsiBlast_CBE 83.4443% -96 - C2 -2JCV 8.8 DXR_MYCTU
61 PsiBlast_CBE 83.3443% -96 - C2 -4A03 9.6 DXR_MYCTU
100 PsiBlast_CBE 83.3043% -95 - C2 -4OOF 10.1 DXR_MYCTU
82 PsiBlast_CBE 83.1943%-101 - C2 -3ZI0 4.6 DXR_MYCTU
87 PsiBlast_CBE 83.0843% -97 - C2 -3ZHX 5.3 DXR_MYCTU
72 PsiBlast_CBE 82.9043%-102 - C2 -2Y1D 4.2 DXR_MYCTU
78 PsiBlast_CBE 82.8043% -93 - C2 -2JD1 9.1 DXR_MYCTU
64 PsiBlast_CBE 82.7943% -98 - C2 -3RAS 9.1 DXR_MYCTU
68 PsiBlast_CBE 82.7243% -98 - C2 -2Y1F 9.5 DXR_MYCTU
85 PsiBlast_CBE 82.6343% -98 - C2 -3ZHY 9.1 DXR_MYCTU
66 PsiBlast_CBE 82.5843% -97 - C2 -2Y1G 5.5 DXR_MYCTU
79 PsiBlast_CBE 82.4143% -96 - C2 -2JCV 9.5 DXR_MYCTU
89 PsiBlast_CBE 82.3443% -96 - C2 -4RCV 9.2 ?
84 PsiBlast_CBE 82.3143% -96 - C2 -3ZHY 7.7 DXR_MYCTU
62 PsiBlast_CBE 82.2043% -96 - C2 -4A03 9.7 DXR_MYCTU
59 PsiBlast_CBE 82.1343% -96 - C2 -4AIC 8.6 DXR_MYCTU
60 PsiBlast_CBE 82.1243% -95 - C2 -4AIC 9.2 DXR_MYCTU
88 PsiBlast_CBE 82.0543% -96 - C2 -4RCV 4.2 ?
94 PsiBlast_CBE 81.6942% -97 - C2 -2JCX 8.9 DXR_MYCTU
63 PsiBlast_CBE 81.4043% -96 - C2 -3RAS 9.5 DXR_MYCTU
83 PsiBlast_CBE 81.1543%-100 - C2 -3ZHZ 5.9 DXR_MYCTU
91 PsiBlast_CBE 80.7442% -95 - C2 -2JD0 7.9 DXR_MYCTU
67 PsiBlast_CBE 80.5043% -94 - C2 -2Y1F 9.0 DXR_MYCTU