Study : Lmo1347 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: ADP_G_7(2EWV) / Model_6(2EWV/A) = [3.6] Download642.66-11.57MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY
Complex: ACP_C_9(3JVV) / Model_23(3JVV/C) = [4.0] Download1054.35-5.40MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY
Complex: ACP_B_7(3JVV) / Model_24(3JVV/B) = [4.1] Download1038.03-1.00MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY
Complex: ACP_A_4(3JVV) / Model_10(3JVV/A) = [4.3] Download951.20-11.57MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY
Complex: ATP_A_2(2EWW) / Model_7(2EWW/A) = [4.4] Download1113.82-7.40MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY
Consensus
[pKd Mean = 4.08]
-960
(s=166)
-7
(s=4)
MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNSSVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGEKCHPLCTHLRRKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY