@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1383: (2016-03-24 )
MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFYINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMILANVSPEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYVKLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGELAKWGTLREINLVKLANRK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_4(1VCF)
IDI2_THET2
[Raw transfer]



FMN_A_4(1VCF)
IDI2_THET2
[Raw transfer]



FMN_A_5(1VCG)
IDI2_THET2
[Raw transfer]



FMN_B_6(3DH7)
?
[Raw transfer]



FMN_M_13(1P0N)
IDI2_BACSU
[Raw transfer]



FMN_A_5(3DH7)
?
[Raw transfer]



FMN_C_8(3DH7)
?
[Raw transfer]
22 PsiBlast_CBE 94.9341% -97 - C3 -1P0K - IDI2_BACSU -
56 PsiBlast_CBE 94.7135% -89 - C3 -2ZRU - IDI2_SULSH -
1 PsiBlast_PDB 94.4141% -97 - C3 -1P0K - IDI2_BACSU -
4 PsiBlast_PDB 94.4035% -87 - C3 -2ZRU - IDI2_SULSH -
54 PsiBlast_CBE 94.2535% -88 - C3 -2ZRU - IDI2_SULSH -
26 PsiBlast_CBE 94.1835% -81 - C3 -3VKJ - IDI2_SULSH -
24 PsiBlast_CBE 94.1335% -82 - C3 -3VKJ - IDI2_SULSH -
51 PsiBlast_CBE 94.0035% -81 - C3 -2ZRV - IDI2_SULSH -
114 HHSearch 93.9241% -99 - C3 -1P0K - IDI2_BACSU -
35 PsiBlast_CBE 93.9235% -81 - C3 -3B04 - IDI2_SULSH -
55 PsiBlast_CBE 93.7835% -87 - C3 -2ZRU - IDI2_SULSH -
3 PsiBlast_PDB 93.7841% -81 - C3 -4N02 - IDI2_STRPS -
21 PsiBlast_CBE 93.7541%-100 - C3 -1P0N 6.5 IDI2_BACSU
14 PsiBlast_PDB 93.7535% -81 - C3 -3VKJ - IDI2_SULSH -
5 PsiBlast_PDB 93.7235% -81 - C3 -2ZRV - IDI2_SULSH -
45 PsiBlast_CBE 93.6235% -81 - C3 -2ZRX - IDI2_SULSH -
36 PsiBlast_CBE 93.5935% -80 - C3 -3B03 - IDI2_SULSH -
102 Fugue 93.5540% -96 - C3 -1P0K - IDI2_BACSU -
38 PsiBlast_CBE 93.5435% -81 - C3 -3B03 - IDI2_SULSH -
8 PsiBlast_PDB 93.4835% -80 - C3 -2ZRY - IDI2_SULSH -
120 HHSearch 82.3132% -87 - C3 -1VCF 8.0 IDI2_THET2
58 PsiBlast_CBE 71.0334% -65 - C3 -3DH7 5.9 ?
15 PsiBlast_PDB 70.7234% -65 - C3 -3DH7 6.1 ?
57 PsiBlast_CBE 70.1834% -71 - C3 -3DH7 5.8 ?
16 PsiBlast_PDB 70.0233% -85 - C3 -1VCF 6.9 IDI2_THET2
17 PsiBlast_PDB 68.4733% -67 - C3 -1VCG 5.8 IDI2_THET2