@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1398: (2016-03-24 )
VNDRQAALDQALKQIEKQFGKGSIMKLGEHSDQNISTISSGSLALDIALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEITPGGRALKFYSTVRLEVRRAEQLKQGTDVMGNKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIGQGRENAKQYLKEHTDIRDEISKRVREEYEIDGSSKEPLDEKEETLSLLDDE

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_2(1MO3)
RECA_MYCTU
[Raw transfer]



AGS_A_2(2ZRE)
RECA_MYCS2
[Raw transfer]



ADP_A_2(2ZRO)
RECA_MYCS2
[Raw transfer]



DTP_B_2(1UBG)
RECA_MYCS2
[Raw transfer]



SAP_B_2(2ODW)
RECA_MYCS2
[Raw transfer]



DTP_A_2(2ZRF)
RECA_MYCS2
[Raw transfer]



DTP_B_2(2ODN)
RECA_MYCS2
[Raw transfer]



DTP_B_2(1MO6)
RECA_MYCTU
[Raw transfer]



AGS_A_2(2ZRJ)
RECA_MYCS2
[Raw transfer]



DTP_A_2(2ZRK)
RECA_MYCS2
[Raw transfer]



DTP_A_2(2ZRM)
RECA_MYCS2
[Raw transfer]



ADP_A_2(2ZRD)
RECA_MYCS2
[Raw transfer]



SAP_B_2(1MO4)
RECA_MYCTU
[Raw transfer]



DTP_A_2(2ZRG)
RECA_MYCS2
[Raw transfer]



ADP_A_6(1XMV)
RECA_ECOLI
[Raw transfer]



ADP_B_2(2OEP)
RECA_MYCS2
[Raw transfer]



ANP_A_3(1XMS)
RECA_ECOLI
[Raw transfer]



SAP_B_2(1UBF)
RECA_MYCS2
[Raw transfer]



AGS_A_2(2ZRA)
RECA_MYCS2
[Raw transfer]



DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]



SAP_B_2(1MO5)
RECA_MYCTU
[Raw transfer]



DTP_A_2(2ZRP)
RECA_MYCS2
[Raw transfer]



ADP_A_3(1G18)
RECA_MYCTU
[Raw transfer]



ADP_B_2(1UBE)
RECA_MYCS2
[Raw transfer]



DTP_A_2(2ZRL)
RECA_MYCS2
[Raw transfer]



GOL_A_2(4PQY)
RECA_MYCTU
[Raw transfer]



GOL_A_5(4PR0)
RECA_MYCTU
[Raw transfer]
26 PsiBlast_CBE 93.6968% -86 - C3 -2ZRH - RECA_MYCS2 -
20 PsiBlast_PDB 93.5768% -82 - C3 -2ZRE 5.6 RECA_MYCS2
25 PsiBlast_CBE 93.4868% -81 - C3 -2ZRJ 7.0 RECA_MYCS2
18 PsiBlast_PDB 93.4068% -79 - C3 -2ZRC - RECA_MYCS2 -
27 PsiBlast_CBE 93.1566% -83 - C3 -4PR0 2.3 RECA_MYCTU
24 PsiBlast_CBE 93.0268% -80 - C3 -2ZRK 8.0 RECA_MYCS2
28 PsiBlast_CBE 93.0166% -86 - C3 -4PQY 2.3 RECA_MYCTU
13 PsiBlast_PDB 92.9568% -80 - C3 -2ZRM 6.7 RECA_MYCS2
14 PsiBlast_PDB 92.4868% -80 - C3 -2ZRO 7.7 RECA_MYCS2
19 PsiBlast_PDB 92.2968% -80 - C3 -2ZRD 6.8 RECA_MYCS2
6 PsiBlast_PDB 92.2468% -80 - C3 -2ODN 8.0 RECA_MYCS2
8 PsiBlast_PDB 92.0968% -79 - C3 -2OE2 - RECA_MYCS2 -
39 PsiBlast_CBE 92.0263% -87 - C3 -3CMT - RECA_ECOLI -
16 PsiBlast_PDB 92.0068% -78 - C3 -2ZR0 - RECA_MYCS2 -
11 PsiBlast_PDB 91.9668% -79 - C3 -2OFO - RECA_MYCS2 -
31 PsiBlast_CBE 91.7366% -80 - C3 -1MO4 5.0 RECA_MYCTU
65 HHSearch 91.6363% -83 - C3 -3CMW - RECA_ECOLI -
22 PsiBlast_CBE 91.6368% -83 - C3 -2ZRF 7.4 RECA_MYCS2
40 PsiBlast_CBE 91.5963% -88 - C3 -3CMT - RECA_ECOLI -
68 HHSearch 91.5863% -85 - C3 -3CMW - RECA_ECOLI -
32 PsiBlast_CBE 91.3566% -81 - C3 -1MO3 6.2 RECA_MYCTU
15 PsiBlast_PDB 91.3168% -83 - C3 -2ZRP 6.1 RECA_MYCS2
21 PsiBlast_CBE 91.2768% -83 - C3 -2ZRG 6.6 RECA_MYCS2
33 PsiBlast_CBE 91.0866% -83 - C3 -1G18 5.2 RECA_MYCTU
17 PsiBlast_PDB 91.0168% -83 - C3 -2ZRA 6.1 RECA_MYCS2
29 PsiBlast_CBE 91.0066% -86 - C3 -1MO6 6.9 RECA_MYCTU
9 PsiBlast_PDB 90.8768% -76 - C3 -2OEP 6.2 RECA_MYCS2
23 PsiBlast_CBE 89.9968% -75 - C3 -2ZRL 5.3 RECA_MYCS2
5 PsiBlast_PDB 89.6668% -85 - C3 -2G88 8.5 RECA_MYCS2
30 PsiBlast_CBE 89.4566% -81 - C3 -1MO5 5.8 RECA_MYCTU
4 PsiBlast_PDB 89.3668% -73 - C3 -1UBG 5.3 RECA_MYCS2
2 PsiBlast_PDB 89.0768% -82 - C3 -1UBE 5.7 RECA_MYCS2
7 PsiBlast_PDB 88.8168% -82 - C3 -2ODW 5.7 RECA_MYCS2
3 PsiBlast_PDB 88.7168% -76 - C3 -1UBF 6.8 RECA_MYCS2
43 PsiBlast_CBE 87.6463% -83 - C3 -1XMV 8.3 RECA_ECOLI
44 PsiBlast_CBE 87.6263% -85 - C3 -1XMS 6.8 RECA_ECOLI