@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1473: (2016-03-25 )
MSKIIGIDLGTTNSAVAVLEGGEAKIIPNPEGARTTPSVVGFKNGERQVGEVAKRAAITNPNTISSIKRHMGTNYKETIEGKDYSPQEISAIILQYLKSYAEDYLGETVDKAVITVPAYFNDAQRQATKDAGKIAGLEVERIINEPTAAALAYGMDKTETDQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEVTLTRAKFDELTHDLVERTIAPTRQALKDANLSASDIDQVILVGGSTRIPAVQETIKKELGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSKSQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDKNGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNNADQLVFTVDKTLKELEGKVEEEEVKKAEAARDELQEALKGEDFDAIKEKTESLNEIVQNLSVKLYEQAAAEQQAAGGAEGQEAPQNDDVVDAEFEEVNDDDKENK

Atome Classification :

(90 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_2(1NGE)
HSP7C_BOVIN
[Raw transfer]




ATP_A_3(1NGG)
HSP7C_BOVIN
[Raw transfer]




ADP_C_6(3IUC)
GRP78_HUMAN
[Raw transfer]




ADP_A_3(3GDQ)
HS71L_HUMAN
[Raw transfer]




ANP_A_3(1NGJ)
HSP7C_BOVIN
[Raw transfer]




ADP_A_4(1NGB)
HSP7C_BOVIN
[Raw transfer]




ANP_A_3(2QWR)
HSP7C_BOVIN
[Raw transfer]




ADP_A_7(1QQM)
HSP7C_BOVIN
[Raw transfer]




ADP_A_3(1ATS)
HSP7C_BOVIN
[Raw transfer]




ADP_A_4(1NGC)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(4J8F)
F10A1_RAT
[Raw transfer]




ADP_B_7(3FE1)
HSP76_HUMAN
[Raw transfer]




ADP_A_3(1NGA)
HSP7C_BOVIN
[Raw transfer]




ATP_A_3(3FZF)
HSP7C_HUMAN
[Raw transfer]




ADP_A_9(2QWL)
HSP7C_BOVIN
[Raw transfer]




ADP_A_3(3I33)
HSP72_HUMAN
[Raw transfer]




ADP_A_7(1BA0)
HSP7C_BOVIN
[Raw transfer]




ATP_B_4(3LDL)
GRP78_HUMAN
[Raw transfer]




ADP_B_10(2QWL)
HSP7C_BOVIN
[Raw transfer]




ATP_B_2(1NGH)
HSP7C_BOVIN
[Raw transfer]




ADP_A_4(2QWQ)
HSP7C_BOVIN
[Raw transfer]




ADP_A_11(2QWM)
HSP7C_BOVIN
[Raw transfer]




ADP_A_7(2QWO)
HSP7C_BOVIN
[Raw transfer]




ADP_A_7(2QWN)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(3QFU)
GRP78_YEAST
[Raw transfer]




ADP_A_4(1NGD)
HSP7C_BOVIN
[Raw transfer]




ADP_A_4(1ATR)
HSP7C_BOVIN
[Raw transfer]




ADP_A_6(1BA1)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(3ATV)
HS71A_HUMAN
[Raw transfer]




ATP_B_2(1NGF)
HSP7C_BOVIN
[Raw transfer]




ADP_C_12(3FE1)
HSP76_HUMAN
[Raw transfer]




ADP_A_6(1QQO)
HSP7C_BOVIN
[Raw transfer]




ADP_A_3(3IUC)
GRP78_HUMAN
[Raw transfer]




ADP_A_7(2QWP)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(3AY9)
HS71A_HUMAN
[Raw transfer]




ADP_A_6(3HSC)
HSP7C_BOVIN
[Raw transfer]




ADP_B_14(3C7N)
HSP7C_BOVIN
[Raw transfer]




ATP_A_3(3LDL)
GRP78_HUMAN
[Raw transfer]




ADP_A_2(3QFU)
GRP78_YEAST
[Raw transfer]




ADP_A_2(4H5T)
HSP7C_HUMAN
[Raw transfer]




ADP_A_4(1HJO)
HS71A_HUMAN
[Raw transfer]




ADP_A_8(2BUP)
HSP7C_BOVIN
[Raw transfer]




ATP_A_8(1KAY)
HSP7C_BOVIN
[Raw transfer]




ANP_A_3(2E8A)
HS71A_HUMAN
[Raw transfer]




ANP_B_4(3LDO)
GRP78_HUMAN
[Raw transfer]




ADP_A_8(1BUP)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(2V7Y)
DNAK_GEOKA
[Raw transfer]




ADP_A_8(1QQN)
HSP7C_BOVIN
[Raw transfer]




ATP_A_8(1KAZ)
HSP7C_BOVIN
[Raw transfer]




ATP_A_8(1KAX)
HSP7C_BOVIN
[Raw transfer]




ADP_A_7(1S3X)
HS71A_HUMAN
[Raw transfer]




ADP_A_2(3ATU)
HS71A_HUMAN
[Raw transfer]




ADP_A_2(3JXU)
HS71A_HUMAN
[Raw transfer]




ANP_A_3(3LDO)
GRP78_HUMAN
[Raw transfer]




ADP_A_4(3FE1)
HSP76_HUMAN
[Raw transfer]




ANP_A_3(1NGI)
HSP7C_BOVIN
[Raw transfer]




ADP_A_8(1HPM)
HSP7C_BOVIN
[Raw transfer]




ADP_B_12(2QWM)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(2V7Y)
DNAK_GEOKA
[Raw transfer]




ATP_A_4(4JNE)
DNAK_ECOLI
[Raw transfer]




ATP_A_4(4JN4)
DNAK_ECOLI
[Raw transfer]




ATP_B_13(4JN4)
DNAK_ECOLI
[Raw transfer]




ATP_B_13(4JNE)
DNAK_ECOLI
[Raw transfer]




3F5_A_3(3M3Z)
HSP7C_HUMAN
[Raw transfer]




3GO_A_3(3FZM)
HSP7C_HUMAN
[Raw transfer]




3P1_A_3(3LDQ)
HSP7C_HUMAN
[Raw transfer]




3P1_A_3(3LDP)
GRP78_HUMAN
[Raw transfer]




3P1_B_4(3LDP)
GRP78_HUMAN
[Raw transfer]




3BH_A_3(3FZH)
HSP7C_HUMAN
[Raw transfer]




3FD_A_4(3FZL)
HSP7C_HUMAN
[Raw transfer]




3BK_A_5(3FZK)
HSP7C_HUMAN
[Raw transfer]




3FD_A_2(4IO8)
HS71A_HUMAN
[Raw transfer]




GOL_B_13(3GL1)
HSP75_YEAST
[Raw transfer]




GOL_A_10(4H5N)
HSP7C_HUMAN
[Raw transfer]




GOL_A_11(4H5R)
HSP7C_HUMAN
[Raw transfer]




GOL_B_20(4H5R)
HSP7C_HUMAN
[Raw transfer]




GOL_A_9(4H5V)
HSP7C_HUMAN
[Raw transfer]




TRS_B_6(3A8Y)
HS71A_HUMAN
[Raw transfer]




TRS_A_5(3A8Y)
HS71A_HUMAN
[Raw transfer]




TRS_C_3(1HX1)
HSP7C_BOVIN
[Raw transfer]




BET_B_12(4H5W)
HSP7C_HUMAN
[Raw transfer]




BET_A_5(4H5W)
HSP7C_HUMAN
[Raw transfer]




6 PsiBlast_PDB 91.8256% -70 - C2 -4B9Q - DNAK_ECOLI -
22 PsiBlast_CBE 91.4056% -66 - C2 -4JN4 10.2 DNAK_ECOLI
3 PsiBlast_PDB 91.2057% -71 - C3 -2KHO - DNAK_ECOLI -
21 PsiBlast_CBE 91.1056% -63 - C2 -4JNE 9.8 DNAK_ECOLI
4 PsiBlast_PDB 91.0156% -66 - C2 -4JN4 10.0 DNAK_ECOLI
112 HHSearch 90.9183% -69 - C2 -2V7Y 8.0 DNAK_GEOKA
2 PsiBlast_PDB 90.8983% -70 - C3 -4ANI - DNAK_GEOKA -
1 PsiBlast_PDB 90.8183% -69 - C2 -2V7Y 8.0 DNAK_GEOKA
5 PsiBlast_PDB 90.2056% -64 - C2 -4JNE 9.9 DNAK_ECOLI
8 PsiBlast_PDB 84.1849% -64 - C2 -1YUW - HSP7C_BOVIN -
7 PsiBlast_PDB 84.0149% -69 - C2 -3C7N 5.1 HSP7C_BOVIN
66 PsiBlast_CBE 74.5346% -77 - C2 -3CQX - HSP7C_MOUSE -
70 PsiBlast_CBE 74.3946% -79 - C2 -3LDQ 5.6 HSP7C_HUMAN
102 Fugue 74.2961% -77 - C2 -1DKG - DNAK_ECOLI -
71 PsiBlast_CBE 74.2646% -78 - C2 -3FZM 5.1 HSP7C_HUMAN
95 PsiBlast_CBE 74.2049% -71 - C2 -3GL1 - HSP75_YEAST -
52 PsiBlast_CBE 73.9547% -75 - C2 -1BA1 7.4 HSP7C_BOVIN
36 PsiBlast_CBE 73.9547% -75 - C2 -1HPM 7.9 HSP7C_BOVIN
94 PsiBlast_CBE 73.8749% -70 - C2 -3GL1 2.0 HSP75_YEAST
111 HHSearch 73.8127% -51 - C2 -3D2F - ? -
74 PsiBlast_CBE 73.7346% -76 - C2 -3FZH 4.8 HSP7C_HUMAN
61 PsiBlast_CBE 73.6946% -74 - C2 -1ATS 7.1 HSP7C_BOVIN
35 PsiBlast_CBE 73.6247% -75 - C2 -1NGI 9.0 HSP7C_BOVIN
54 PsiBlast_CBE 73.6046% -73 - C2 -1NGF 9.0 HSP7C_BOVIN
84 PsiBlast_CBE 73.5146% -76 - C2 -1KAZ 9.0 HSP7C_BOVIN
46 PsiBlast_CBE 73.4146% -73 - C2 -2QWQ 6.5 HSP7C_BOVIN
50 PsiBlast_CBE 73.3346% -74 - C2 -1BUP 7.4 HSP7C_BOVIN
59 PsiBlast_CBE 73.3246% -74 - C2 -1NGE 9.1 HSP7C_BOVIN
51 PsiBlast_CBE 73.2446% -74 - C2 -1NGB 7.1 HSP7C_BOVIN
83 PsiBlast_CBE 73.1647% -74 - C2 -3A8Y 4.2 HS71A_HUMAN
45 PsiBlast_CBE 73.1646% -72 - C2 -2QWR 7.0 HSP7C_BOVIN
49 PsiBlast_CBE 73.1546% -73 - C2 -2QWN 7.5 HSP7C_BOVIN
87 PsiBlast_CBE 73.1446% -76 - C2 -1KAY 9.0 HSP7C_BOVIN
88 PsiBlast_CBE 73.1346% -71 - C2 -1QQM 6.9 HSP7C_BOVIN
90 PsiBlast_CBE 73.0646% -75 - C2 -2BUP 6.5 HSP7C_BOVIN
89 PsiBlast_CBE 73.0346% -72 - C2 -1QQO 6.8 HSP7C_BOVIN
73 PsiBlast_CBE 73.0346% -78 - C2 -3FZK 5.2 HSP7C_HUMAN
69 PsiBlast_CBE 73.0346% -75 - C2 -3M3Z 4.5 HSP7C_HUMAN
53 PsiBlast_CBE 73.0046% -75 - C2 -1NGH 9.2 HSP7C_BOVIN
56 PsiBlast_CBE 72.9146% -71 - C2 -1ATR 7.4 HSP7C_BOVIN
40 PsiBlast_CBE 72.9146% -72 - C2 -4H5T 6.0 HSP7C_HUMAN
58 PsiBlast_CBE 72.8746% -74 - C2 -1NGG 8.7 HSP7C_BOVIN
33 PsiBlast_CBE 72.8647% -72 - C2 -3HSC 7.4 HSP7C_BOVIN
75 PsiBlast_CBE 72.7846% -77 - C2 -3FZF 6.6 HSP7C_HUMAN
91 PsiBlast_CBE 72.7247% -73 - C2 -1HJO 7.6 HS71A_HUMAN
27 PsiBlast_CBE 72.7146% -72 - C2 -2QWL 7.3 HSP7C_BOVIN
113 HHSearch 72.7054% -68 * C2 *3QFU 7.6 GRP78_YEAST
26 PsiBlast_CBE 72.6346% -72 - C2 -2QWM 7.1 HSP7C_BOVIN
17 PsiBlast_PDB 72.5946% -71 - C2 -2QWM 7.4 HSP7C_BOVIN
34 PsiBlast_CBE 72.5747% -71 - C2 -1NGJ 8.7 HSP7C_BOVIN
57 PsiBlast_CBE 72.5546% -74 - C2 -1NGA 7.4 HSP7C_BOVIN
47 PsiBlast_CBE 72.4846% -75 - C2 -2QWP 7.2 HSP7C_BOVIN
80 PsiBlast_CBE 72.4747% -69 - C2 -3ATV 7.7 HS71A_HUMAN
86 PsiBlast_CBE 72.3646% -74 - C2 -1KAX 9.2 HSP7C_BOVIN
60 PsiBlast_CBE 72.3346% -73 - C2 -1NGC 7.4 HSP7C_BOVIN
55 PsiBlast_CBE 72.3246% -75 - C2 -1NGD 6.9 HSP7C_BOVIN
48 PsiBlast_CBE 72.3246% -71 - C2 -2QWO 7.3 HSP7C_BOVIN
72 PsiBlast_CBE 72.2646% -74 - C2 -3FZL 5.6 HSP7C_HUMAN
85 PsiBlast_CBE 72.2547% -71 - C2 -4J8F 6.8 F10A1_RAT (first)
114 HHSearch 72.1851% -71 - C2 -3I33 7.6 HSP72_HUMAN
16 PsiBlast_PDB 72.1346% -71 - C2 -2QWL 7.5 HSP7C_BOVIN
39 PsiBlast_CBE 72.0246% -69 - C2 -4H5V 2.3 HSP7C_HUMAN
98 PsiBlast_CBE 72.0047% -70 - C2 -4IO8 6.4 HS71A_HUMAN
76 PsiBlast_CBE 71.9947% -71 - C2 -2E8A 9.6 HS71A_HUMAN
81 PsiBlast_CBE 71.8647% -68 - C2 -3ATU 7.2 HS71A_HUMAN
30 PsiBlast_CBE 71.8548% -74 - C2 -3LDP 5.4 GRP78_HUMAN
97 PsiBlast_CBE 71.8246% -71 - C2 -1QQN 7.0 HSP7C_BOVIN
79 PsiBlast_CBE 71.7247% -70 - C2 -3AY9 7.3 HS71A_HUMAN
14 PsiBlast_PDB 71.7248% -73 - C2 -3IUC 7.1 GRP78_HUMAN
38 PsiBlast_CBE 71.7046% -69 - C2 -4H5W 2.6 HSP7C_HUMAN
62 PsiBlast_CBE 71.6946% -75 - C2 -1BA0 7.4 HSP7C_BOVIN
68 PsiBlast_CBE 71.6546% -73 - C2 -1HX1 3.0 HSP7C_BOVIN
42 PsiBlast_CBE 71.5846% -67 - C2 -4H5R 2.8 HSP7C_HUMAN
41 PsiBlast_CBE 71.4546% -67 - C2 -4H5R 2.7 HSP7C_HUMAN
96 PsiBlast_CBE 71.3447% -71 - C2 -1S3X 7.8 HS71A_HUMAN
13 PsiBlast_PDB 71.2950% -68 - C2 -3QFU 7.6 GRP78_YEAST
78 PsiBlast_CBE 71.2347% -69 - C2 -3JXU 7.4 HS71A_HUMAN
64 PsiBlast_CBE 70.8948% -65 - C2 -3FE1 7.0 HSP76_HUMAN
32 PsiBlast_CBE 70.8448% -73 - C2 -3LDL 8.8 GRP78_HUMAN
82 PsiBlast_CBE 70.8047% -70 - C2 -3A8Y 4.2 HS71A_HUMAN
44 PsiBlast_CBE 70.7246% -66 - C2 -4H5N 2.3 HSP7C_HUMAN
37 PsiBlast_CBE 70.6746% -70 - C2 -4H5W 1.9 HSP7C_HUMAN
99 PsiBlast_CBE 70.5747% -69 - C2 -3GDQ 7.2 HS71L_HUMAN
25 PsiBlast_CBE 70.0048% -71 - C2 -3IUC 7.2 GRP78_HUMAN
65 PsiBlast_CBE 69.9848% -67 - C2 -3FE1 7.3 HSP76_HUMAN
63 PsiBlast_CBE 69.9148% -67 - C2 -3FE1 7.6 HSP76_HUMAN
18 PsiBlast_PDB 69.7448% -69 - C2 -3LDL 8.1 GRP78_HUMAN
20 PsiBlast_PDB 69.7348% -68 - C2 -3LDO 8.5 GRP78_HUMAN
31 PsiBlast_CBE 69.4048% -68 - C2 -3LDO 8.7 GRP78_HUMAN
29 PsiBlast_CBE 69.3948% -67 - C2 -3LDP 5.6 GRP78_HUMAN