@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1494: (2016-03-25 )
MTIGIIGAMEEEVELLKNSMSSVEEIVIGGAKFYIGEIASKEVVLLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDVTEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFATSENKAVYGLVVTNDSFIMRPDQHEIIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLAAKQSATCIIELLKTI

Atome Classification :

(67 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MTM_A_3(3EEI)
?
[Raw transfer]




2EL_B_7(4F2P)
?
[Raw transfer]




MTM_A_3(3EEI)
?
[Raw transfer]




TDI_B_8(4F2W)
?
[Raw transfer]




TDI_A_5(1Y6Q)
MTNN_ECOLI
[Raw transfer]




TDI_B_6(1Y6Q)
MTNN_ECOLI
[Raw transfer]




MTA_D_4(1Z5O)
MTNN_ECOLI
[Raw transfer]




TDI_A_3(4F2W)
?
[Raw transfer]




MTH_D_4(1NC1)
MTNN_ECOLI
[Raw transfer]




4CT_B_6(3O4V)
MTNN_ECOLI
[Raw transfer]




TDI_A_3(4X24)
?
[Raw transfer]




MTM_B_4(3EEI)
?
[Raw transfer]




BIG_B_5(4F3C)
?
[Raw transfer]




MTH_C_3(1NC1)
MTNN_ECOLI
[Raw transfer]




TDI_B_5(4X24)
?
[Raw transfer]




TDI_A_3(4WKB)
?
[Raw transfer]




FMC_A_2(3BL6)
MTNN_STAAM
[Raw transfer]




FMC_A_2(3BL6)
MTNN_STAAM
[Raw transfer]




MTA_C_3(1Z5O)
MTNN_ECOLI
[Raw transfer]




MTM_D_4(1Y6R)
MTNN_ECOLI
[Raw transfer]




BIG_A_3(4F3C)
?
[Raw transfer]




TDI_B_4(4WKB)
?
[Raw transfer]




MTA_B_3(4G41)
?
[Raw transfer]




HCE_A_3(4F3K)
?
[Raw transfer]




BIG_A_2(4WKC)
?
[Raw transfer]




DF9_A_3(3DF9)
MTNN_ECO57
[Raw transfer]




FMC_C_3(1NC3)
MTNN_ECOLI
[Raw transfer]




FMC_B_4(3NM5)
MQMTN_HELPJ
[Raw transfer]




SAH_A_2(4OY3)
MQMTN_HELPJ
[Raw transfer]




HCE_B_5(4F3K)
?
[Raw transfer]




FMC_D_4(1NC3)
MTNN_ECOLI
[Raw transfer]




MTM_C_3(1Y6R)
MTNN_ECOLI
[Raw transfer]




BIG_C_5(3DP9)
MTNN_VIBCH
[Raw transfer]




FMC_A_3(3NM5)
MQMTN_HELPJ
[Raw transfer]




BIG_A_3(3DP9)
MTNN_VIBCH
[Raw transfer]




MTA_B_4(4BMZ)
MQMTN_HELPY
[Raw transfer]




MTA_A_2(4P54)
MQMTN_HELPJ
[Raw transfer]




MTA_A_3(4BMZ)
MQMTN_HELPY
[Raw transfer]




DF9_B_4(3DF9)
MTNN_ECO57
[Raw transfer]




4CT_A_3(3O4V)
MTNN_ECOLI
[Raw transfer]




4F0_A_2(4YML)
?
[Raw transfer]




BIG_A_2(4FFS)
MQMTN_HELPJ
[Raw transfer]




SAH_A_4(4G89)
MTNN_KLEP7
[Raw transfer]




GOL_A_4(1Z5P)
MTNN_ECOLI
[Raw transfer]




Q88_A_2(3MMS)
?
[Raw transfer]




ADE_B_4(4BMX)
MQMTN_HELPY
[Raw transfer]




ADE_B_2(3NM6)
MQMTN_HELPJ
[Raw transfer]




SR1_C_3(1Z5N)
MTNN_ECOLI
[Raw transfer]




ADE_B_4(4QEZ)
MTNN_BACAN
[Raw transfer]




ADE_A_6(4QEZ)
MTNN_BACAN
[Raw transfer]




SR1_E_5(1Z5N)
MTNN_ECOLI
[Raw transfer]




2WP_A_2(4OJT)
MQMTN_HELPJ
[Raw transfer]




ADE_C_9(4QEZ)
MTNN_BACAN
[Raw transfer]




ADE_D_4(1JYS)
MTNN_ECOLI
[Raw transfer]




ADE_C_3(1JYS)
MTNN_ECOLI
[Raw transfer]




TRS_A_3(3NM4)
MQMTN_HELPJ
[Raw transfer]




EDO_B_6(3NM4)
MQMTN_HELPJ
[Raw transfer]




EDO_A_11(4F1W)
?
[Raw transfer]




PG4_A_5(4F1W)
?
[Raw transfer]




PGE_B_15(4F1W)
?
[Raw transfer]




EDO_A_6(4F2W)
?
[Raw transfer]




PE5_A_3(1Z5P)
MTNN_ECOLI
[Raw transfer]




12 PsiBlast_PDB 95.2847%-118 - C1 -1ZOS - ? -
70 Fugue 95.2348%-115 - C1 -1ZOS - ? -
80 HHSearch 95.0048%-115 - C1 -1ZOS - ? -
32 PsiBlast_CBE 94.9047%-120 - C1 -1ZOS - ? -
33 PsiBlast_CBE 94.8147%-120 - C1 -1ZOS - ? -
30 PsiBlast_CBE 94.5147%-121 - C1 -1ZOS - ? -
31 PsiBlast_CBE 94.3847%-120 - C1 -1ZOS - ? -
38 PsiBlast_CBE 94.3548%-126 - C1 -1Z5P 2.5 MTNN_ECOLI
34 PsiBlast_CBE 94.3547%-118 - C1 -1ZOS - ? -
21 PsiBlast_CBE 93.9649%-113 - C1 -4X24 6.1 ?
4 PsiBlast_PDB 93.5948%-119 - C1 -4G89 3.5 MTNN_KLEP7
48 PsiBlast_CBE 93.5148%-117 - C1 -3EEI 6.3 ?
49 PsiBlast_CBE 93.3448%-117 - C1 -3EEI 6.1 ?
3 PsiBlast_PDB 92.8949%-111 - C1 -4X24 6.3 ?
7 PsiBlast_PDB 92.8052%-121 - C1 -4F1W 2.1 ?
28 PsiBlast_CBE 92.7552%-114 - C1 -4F2P 6.7 ?
81 HHSearch 92.7051%-116 - C1 -3BL6 6.2 MTNN_STAAM
11 PsiBlast_PDB 92.6152%-114 - C1 -4F3K 6.0 ?
19 PsiBlast_PDB 92.5048%-117 - C1 -1Y6Q 6.4 MTNN_ECOLI
45 PsiBlast_CBE 92.3848%-117 - C1 -1Z5N 3.7 MTNN_ECOLI
82 HHSearch 92.3348%-115 * C1 *3EEI 6.1 ?
40 PsiBlast_CBE 92.2548%-114 - C1 -1Y6Q 6.3 MTNN_ECOLI
9 PsiBlast_PDB 92.1852%-114 - C1 -4F2W 6.6 ?
27 PsiBlast_CBE 92.0952%-114 - C1 -4F2W 6.4 ?
37 PsiBlast_CBE 91.9848%-116 - C1 -3DF9 7.1 MTNN_ECO57
46 PsiBlast_CBE 91.9648%-116 - C1 -1Z5O 6.7 MTNN_ECOLI
15 PsiBlast_PDB 91.9148%-113 - C1 -4YML 6.5 ?
25 PsiBlast_CBE 91.8252%-111 - C1 -4F3K 6.0 ?
47 PsiBlast_CBE 91.7448%-115 - C1 -1Z5O 6.5 MTNN_ECOLI
13 PsiBlast_PDB 91.7348%-113 - C1 -3O4V 7.4 MTNN_ECOLI
14 PsiBlast_PDB 91.7148%-112 - C1 -4WKC 7.0 ?
6 PsiBlast_PDB 91.6848%-112 - C1 -4WKB 6.4 ?
1 PsiBlast_PDB 91.5849%-116 - C1 -3BL6 6.2 MTNN_STAAM
24 PsiBlast_CBE 91.5348%-111 - C1 -4WKB 6.3 ?
10 PsiBlast_PDB 91.4452%-112 - C1 -4F3C 7.0 ?
44 PsiBlast_CBE 91.3948%-115 - C1 -1Z5N 3.4 MTNN_ECOLI
53 PsiBlast_CBE 91.2546%-117 - C1 -3MMS 4.2 ?
17 PsiBlast_PDB 91.1748%-116 - C1 -1NC3 6.1 MTNN_ECOLI
18 PsiBlast_PDB 91.1448%-115 - C1 -1NC1 5.8 MTNN_ECOLI
26 PsiBlast_CBE 91.1052%-112 - C1 -4F3C 6.6 ?
39 PsiBlast_CBE 91.0248%-114 - C1 -1Y6R 6.3 MTNN_ECOLI
36 PsiBlast_CBE 90.9948%-115 - C1 -3DF9 7.0 MTNN_ECO57
23 PsiBlast_CBE 90.9848%-115 - C1 -3DP9 6.3 MTNN_VIBCH
42 PsiBlast_CBE 90.8348%-113 - C1 -1NC1 6.3 MTNN_ECOLI
43 PsiBlast_CBE 90.7648%-122 - C1 -1JYS 3.8 MTNN_ECOLI
35 PsiBlast_CBE 90.6948%-113 - C1 -3O4V 7.4 MTNN_ECOLI
20 PsiBlast_PDB 90.4148%-114 - C1 -1Y6R 6.4 MTNN_ECOLI
29 PsiBlast_CBE 90.3052%-112 - C1 -4F1W 2.0 ?
5 PsiBlast_PDB 90.2248%-115 - C1 -3DP9 6.5 MTNN_VIBCH
41 PsiBlast_CBE 89.8948%-113 - C1 -1NC3 6.2 MTNN_ECOLI
16 PsiBlast_PDB 89.3648%-122 - C1 -1JYS 3.7 MTNN_ECOLI
54 PsiBlast_CBE 89.3041%-124 - C1 -4G41 6.6 ?
51 PsiBlast_CBE 88.4347%-109 - C1 -4QEZ 3.4 MTNN_BACAN
52 PsiBlast_CBE 88.2047%-110 - C1 -4QEZ 4.6 MTNN_BACAN
50 PsiBlast_CBE 87.6047%-110 - C1 -4QEZ 3.7 MTNN_BACAN
67 PsiBlast_CBE 71.7932% -95 - C1 -4BMZ 6.5 MQMTN_HELPY
68 PsiBlast_CBE 71.6632% -95 - C1 -4BMZ 6.6 MQMTN_HELPY
56 PsiBlast_CBE 70.9634%-100 - C1 -4FFS 6.9 MQMTN_HELPJ
65 PsiBlast_CBE 70.7332% -92 - C1 -4BMX 4.2 MQMTN_HELPY
57 PsiBlast_CBE 70.3834% -98 - C1 -4OJT 3.6 MQMTN_HELPJ
59 PsiBlast_CBE 69.9334% -96 - C1 -3NM5 6.0 MQMTN_HELPJ
60 PsiBlast_CBE 69.8034% -98 - C1 -3NM5 5.9 MQMTN_HELPJ
61 PsiBlast_CBE 69.5234%-107 - C1 -3NM4 3.5 MQMTN_HELPJ
63 PsiBlast_CBE 69.1833% -99 - C1 -4P54 6.8 MQMTN_HELPJ
64 PsiBlast_CBE 69.0733% -98 - C1 -4OY3 7.3 MQMTN_HELPJ
62 PsiBlast_CBE 69.0334% -96 - C1 -3NM4 2.4 MQMTN_HELPJ
58 PsiBlast_CBE 68.6234% -96 - C1 -3NM6 4.0 MQMTN_HELPJ