Study : Lmo1505 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: ATP_C_3(1VCI) / Model_44(1VCI/A) = [3.1] Download794.294.71MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSGKTTFLSLAGGLDTQKEGDIYYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNVTTAMEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETELIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSFVEKKQSMNSLINS
Complex: AGS_B_6(3C4J) / Model_27(3C4J/B) = [3.4] Download510.594.21MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSGKTTFLSLAGGLDTQKEGDIYYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNVTTAMEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETELIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSFVEKKQSMNSLINS
Complex: ADP_B_6(2OLJ) / Model_35(2OLJ/B) = [4.1] Download673.66-0.83MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSGKTTFLSLAGGLDTQKEGDIYYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNVTTAMEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETELIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSFVEKKQSMNSLINS
Complex: AT4_D_8(2OLK) / Model_32(2OLK/D) = [4.1] Download542.775.86MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSGKTTFLSLAGGLDTQKEGDIYYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNVTTAMEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETELIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSFVEKKQSMNSLINS
Complex: ATP_A_5(1B0U) / Model_41(1B0U/A) = [4.3] Download595.694.21MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSGKTTFLSLAGGLDTQKEGDIYYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNVTTAMEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETELIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSFVEKKQSMNSLINS
Consensus
[pKd Mean = 3.80]
-623
(s=101)
3
(s=2)
MTKVLTFENISYWYKTKDESILNDINYDFEAGVFYTVVGSSGSGKTTFLSLAGGLDTQKEGDIYYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNVTTAMEITHVNQPDKKAFALSMLEKVGITEEMARQKVLTLSGGQQQRVSIARALCCETELIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSFVEKKQSMNSLINS