@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1567: (2016-03-26 )
MTLSKGLENVYVAETSISSIIDDMLTYVGYGIDDLMENNASFEEVIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSMLGVFDTEAELDDGEAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYMITGEEADELSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPLHGGANERVFDMLEEIDQAGDVRNYIQEKIDTKQKIMGFGHRVYRGGDPRAQHLREMSRKLTAEKGEEKWFDISLQVEESVWELKHLKPNVDFYSASVYHALGIDRDLFTLVFSVSRVSGWLAHIFEQYRDNRLIRPRAIYVGPENRSYLPVEERI

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_D_4(1AJ8)
CISY_PYRFU
[Raw transfer]




AMX_E_5(1CSH)
CISY_CHICK
[Raw transfer]




COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]




COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]




COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]




COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]




GOL_A_4(1IOM)
?
[Raw transfer]




GOL_A_4(1IOM)
?
[Raw transfer]




GOL_D_4(1VGM)
?
[Raw transfer]




GOL_D_4(1VGM)
?
[Raw transfer]




CIT_E_5(1A59)
PRPC_ABDS2
[Raw transfer]




CIT_F_6(1AJ8)
CISY_PYRFU
[Raw transfer]




FLC_A_3(2P2W)
?
[Raw transfer]




FLC_A_3(2P2W)
?
[Raw transfer]




88 HHSearch 97.0742% -92 - C11 -1A59 7.4 PRPC_ABDS2
81 HHSearch 96.9344%-101 - C11 -1VGP - ? -
89 HHSearch 96.9242% -93 - C11 -2IBP - ? -
1 PsiBlast_PDB 96.6243%-101 - C11 -1VGP - ? -
3 PsiBlast_PDB 96.6145% -93 - C11 -1IXE - ? -
77 HHSearch 96.2545% -87 - C11 -1IOM 3.1 ?
2 PsiBlast_PDB 96.2545% -86 - C11 -1IOM 3.0 ?
6 PsiBlast_PDB 96.1840% -98 - C11 -2IBP - ? -
25 PsiBlast_CBE 96.0940% -98 - C11 -2IBP - ? -
24 PsiBlast_CBE 95.8042% -95 - C11 -1AJ8 7.9 CISY_PYRFU
21 PsiBlast_CBE 95.5845% -92 - C11 -1IXE - ? -
22 PsiBlast_CBE 95.4745% -94 - C11 -1IXE - ? -
97 Fugue 95.2743% -98 * C11 *1AJ8 7.0 CISY_PYRFU
23 PsiBlast_CBE 95.2345% -89 - C11 -1IXE - ? -
4 PsiBlast_PDB 95.1942% -95 - C11 -1AJ8 - CISY_PYRFU -
78 HHSearch 94.5242% -91 - C11 -1AJ8 7.0 CISY_PYRFU
10 PsiBlast_PDB 94.3738% -93 - C11 -1VGM 2.2 ?
5 PsiBlast_PDB 94.3641% -88 - C11 -1A59 7.4 PRPC_ABDS2
82 HHSearch 94.1339% -90 - C11 -1O7X - CISY_SULSO -
86 HHSearch 93.2941% -90 - C11 -3HWK - PRPC_MYCTU -
84 HHSearch 92.7238% -86 - C11 -1VGM 2.2 ?
80 HHSearch 90.6340% -99 - C11 -2P2W 3.8 ?
9 PsiBlast_PDB 89.3639% -93 - C11 -2P2W 3.8 ?