@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1586: (2016-03-26 )
MAKTIFYFSYRKTEELHAKAKELKKITTDYGYELTDDYQKANVIISIGGDGAFLKSVRETGFRQDCLYAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLVRRYPTIYGTVNNTKAFYVLNEFNIRSSIIRTLTMDLYINDSHFETFRGDGMVISTPTGSTAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGNNEFPMIGMDSEALSIQHVHEVNLEVGDRFINIIKLPKNSFWDKVKRNFL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A22_A_2(4DY6)
NADK1_LISMO
[Raw transfer]




NAD_A_2(2I29)
NADK1_LISMO
[Raw transfer]




NAP_A_2(2I2A)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2I2C)
NADK1_LISMO
[Raw transfer]




A2D_A_2(2I2D)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2Q5F)
NADK1_LISMO
[Raw transfer]




ZNB_A_3(3V8P)
NADK1_LISMO
[Raw transfer]




NAD_A_3(2I2F)
NADK1_LISMO
[Raw transfer]




GOL_A_5(3V7U)
NADK1_LISMO
[Raw transfer]




MTA_A_2(3V7U)
NADK1_LISMO
[Raw transfer]




A3N_A_4(3V7Y)
NADK1_LISMO
[Raw transfer]




AOC_A_3(3V80)
NADK1_LISMO
[Raw transfer]




ZAS_A_2(3V7W)
NADK1_LISMO
[Raw transfer]




CC5_A_3(2I2B)
NADK1_LISMO
[Raw transfer]




5NB_A_2(3V8R)
NADK1_LISMO
[Raw transfer]




Z8B_A_2(3V8M)
NADK1_LISMO
[Raw transfer]




GOL_A_5(3V7W)
NADK1_LISMO
[Raw transfer]




ZAS_A_3(3V7W)
NADK1_LISMO
[Raw transfer]




AOC_A_2(3V80)
NADK1_LISMO
[Raw transfer]




5CI_A_3(3V8N)
NADK1_LISMO
[Raw transfer]




5NB_A_3(3V8R)
NADK1_LISMO
[Raw transfer]




MTA_A_3(3V7U)
NADK1_LISMO
[Raw transfer]




5N5_A_2(3V8Q)
NADK1_LISMO
[Raw transfer]




CC5_A_2(2I2B)
NADK1_LISMO
[Raw transfer]




Z8B_A_3(3V8M)
NADK1_LISMO
[Raw transfer]




21 PsiBlast_CBE 87.3433% -80 - C4 -2I1W - NADK1_LISMO -
4 PsiBlast_PDB 87.0133% -81 - C4 -2I1W - NADK1_LISMO -
6 PsiBlast_PDB 86.5433% -79 - C4 -2I2A 7.4 NADK1_LISMO
25 HHSearch 86.3121% -92 * C4 *1U0T - NADK_MYCTU -
5 PsiBlast_PDB 86.2833% -83 - C4 -2I29 6.8 NADK1_LISMO
8 PsiBlast_PDB 86.1333% -77 - C4 -2I2C 7.7 NADK1_LISMO
12 PsiBlast_PDB 86.1133% -77 - C4 -3V7W 4.6 NADK1_LISMO
18 PsiBlast_PDB 85.8933% -79 - C4 -2I2F 6.2 NADK1_LISMO
45 Fugue 85.3623% -93 - C4 -2AN1 - NADK_SALTY -
23 PsiBlast_CBE 85.3233% -79 - C4 -2I1W - NADK1_LISMO -
7 PsiBlast_PDB 84.9733% -77 - C4 -2I2B 4.4 NADK1_LISMO
10 PsiBlast_PDB 84.8633% -79 - C4 -4DY6 7.3 NADK1_LISMO
17 PsiBlast_PDB 84.8033% -75 - C4 -3V8P 7.6 NADK1_LISMO
11 PsiBlast_PDB 84.7133% -76 - C4 -3V7U 4.3 NADK1_LISMO
1 PsiBlast_PDB 84.7133% -76 - C4 -2Q5F 7.6 NADK1_LISMO
3 PsiBlast_PDB 84.6333% -80 - C4 -3V8R 4.7 NADK1_LISMO
15 PsiBlast_PDB 84.3333% -80 - C4 -3V8M 4.4 NADK1_LISMO
16 PsiBlast_PDB 84.2233% -78 - C4 -3V8N 4.6 NADK1_LISMO
14 PsiBlast_PDB 84.2233% -80 - C4 -3V80 4.2 NADK1_LISMO
24 HHSearch 84.1821% -95 - C4 -3PFN - NADK_HUMAN -
9 PsiBlast_PDB 83.6233% -82 - C4 -2I2D 5.5 NADK1_LISMO
2 PsiBlast_PDB 83.2633% -78 - C4 -3V8Q 4.2 NADK1_LISMO
13 PsiBlast_PDB 82.8733% -79 - C4 -3V7Y 3.3 NADK1_LISMO