Study : Lmo1593 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: PLP_A_3(3LVK) / Model_3(3LVK/A) = [3.5] Download558.988.14MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVRVVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTKIAQMSDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK
Complex: CYS_F_6(1ECX) / Model_21(1ECX/B) = [3.6] Download827.7029.23MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVRVVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTKIAQMSDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK
Complex: PLP_C_3(1ECX) / Model_59(1ECX/A) = [3.8] Download582.7112.04MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVRVVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTKIAQMSDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK
Complex: PLP_C_3(1ECX) / Model_1(1ECX/A) = [3.8] Download584.6412.04MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVRVVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTKIAQMSDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK
Complex: PLP_B_4(3VAX) / Model_25(3VAX/B) = [3.8] Download528.794.62MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVRVVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTKIAQMSDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK
Consensus
[pKd Mean = 3.70]
-616
(s=107)
13
(s=8)
MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVRVVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTKIAQMSDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK