@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1633: (2016-03-27 )
MRKMKKMDADTLTAILAFQRLSGTGKSLLEGAAKDAEAGRYSIIAINPVHEIKVYQHDYYIDGTHQVVADPLKEIELFIEKAREDELELPLDSGAIGYVGYDVIALYEDLGEIPVETRDIPDIRFYVYESFVIMDHQAEELILVQDNCYSGRSEADLDKALESMLTELTTPKKDEHKAVHVPKMSYKSNYTKDEYMGLVKKAKTYIQEGDFFQIVLSQRLEADFTVKPFDYYRKLRLLNPSPYLYFIDFGDTVLIGSSPESLIKTKGRTVITNPIAGTRRRGATKQEDELLASELLSDEKELAEHRMLVDLGRNDIGKIAETGSVHVPVYLTIERYRFLMHLVSVVEGTLKTGLTAIDALRSTLPAGTVSGAPKIRAMERIYEWENVKRGPYAGAVGYLTKNGDSDFALSIRTMVLHNGKAYVQAGAGIVYDSDPESEYLETLQKAKALLEVGE

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RVA_B_8(3RV6)
MBTI_MYCTU
[Raw transfer]



VAE_A_3(3RV6)
MBTI_MYCTU
[Raw transfer]



ISC_A_5(3HWO)
ENTC_ECOLI
[Raw transfer]



0GA_A_5(5CWA)
?
[Raw transfer]



SAL_A_8(2FN1)
?
[Raw transfer]



BEZ_A_4(3R75)
?
[Raw transfer]



15P_A_5(4GRH)
?
[Raw transfer]



PYR_A_7(2FN1)
?
[Raw transfer]
1 PsiBlast_PDB 97.9338% -80 - C3 -5CWA 3.5 ?
46 HHSearch 93.9635% -62 - C3 -1I1Q - TRPE_SALTY -
58 Fugue 92.6933% -65 - C3 -1I1Q - TRPE_SALTY -
44 HHSearch 91.4932% -73 - C3 -1K0E - PABB_ECOLI -
61 Fugue 91.4531% -68 - C3 -1K0E - PABB_ECOLI -
3 PsiBlast_PDB 89.8231% -71 - C3 -1K0E - PABB_ECOLI -
21 PsiBlast_CBE 86.9731% -73 - C3 -1K0G - PABB_ECOLI -
5 PsiBlast_PDB 86.5738% -75 - C3 -1I7Q - TRPE_SERMA -
24 PsiBlast_CBE 86.5138% -76 - C3 -1I7Q - TRPE_SERMA -
22 PsiBlast_CBE 86.3631% -75 - C3 -1K0E - PABB_ECOLI -
6 PsiBlast_PDB 86.0838% -75 - C3 -1I7S - TRPE_SERMA -
2 PsiBlast_PDB 85.8039% -71 - C3 -1I1Q - TRPE_SALTY -
4 PsiBlast_PDB 85.4831% -69 - C3 -1K0G - PABB_ECOLI -
23 PsiBlast_CBE 84.4538% -74 - C3 -1I7S - TRPE_SERMA -
45 HHSearch 75.2438% -84 - C- -1QDL - TRPE_SULSO -
65 Fugue 73.8922% -52 - C3 -3BZM - MENF_ECOLI -
62 Fugue 72.7322% -50 - C3 -2EUA - MENF_ECOLI -
43 PsiBlast_CBE 72.1632% -45 - C3 -3LOG - MBTI_MYCTU -
66 Fugue 71.4321% -65 - C3 -3HWO - ENTC_ECOLI -
36 PsiBlast_CBE 70.3432% -47 - C3 -2G5F - MBTI_MYCTU -
7 PsiBlast_PDB 69.7140% -67 - C3 -4GRH 2.2 ?
34 PsiBlast_CBE 68.1132% -49 - C3 -3RV6 4.4 MBTI_MYCTU
12 PsiBlast_PDB 67.5332% -42 - C3 -3RV6 5.9 MBTI_MYCTU