@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1641: (2016-03-27 )
MTNWKEKARASFQLNDKTYHYYKLKTLEEDKLTNIEKLPYSVRVLLESVLRQADGRVIKDSHVEDLAHWSKDGNEGEVPFKPARVILQDFTGVPAVVDLASLRKAMADLGGDPEKINPEIPVDLVVDHSVQVDSYANPEALKINMELEFKRNMERYQFLNWAQKAFDNYRAVPPATGIVHQVNLEYLANVVIANEVADGEFVAFPDSLVGTDSHTTMINGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVKLLGALPNGATATDFALKVTQVLREQKVVGKFVEFYGPGVATLPLADRATVANMAPEYGATCGFFPVDKEALNYLKLTGRDKEQIELVEAYLEANDLFFTPEKVEPNYTQTVEIDLSAIEPNLAGPKRPQDLIPLSKMKETFRESITAKAGNQGFGLDKSALDKEVTVTFGNGDQSTMKTGSVAIAAITSCTNTSNPYVMLSAGLVAKKAVEKGLEVPKFVKTSLAPGSKVVTGYLEKAGLLPYLEKLGFDLVGYGCTTCIGNSGPLKEEIEEAIQDSDLLVSAVLSGNRNFEGRIHALVKANFLASPPLVVAYALAGTTNVDMLTEPIGRGNNGEEVFLDDIWPSSEEVKALVEETVTPELFREQYAHVFDENEAWNAIETTEDALYKWDENSTYIANPPFFDNLAKEAGKVEALSGLRIIGKFGDSVTTDHISPAGAIGKDTPAGKFLQEQGVAIRDFNSYGSRRGHHDVMMRGTFANIRIKNQIAPGTEGGYTTYWPTGEVMSIYDASRKYIENNTGLVILAGDDYGMGSSRDWAAKGTNLLGIKTVIAKSYERIHRSNLVMMGVLPLQFQPGEDAETLGLTGSESLQVEIGEDVAPRDLVKVTATREDGSSITFDALARFDSEVEIDYYRHGGILPMVLRGKLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NIC_A_3(8ACN)
ACON_BOVIN
[Raw transfer]



ICT_A_3(1B0J)
ACON_PIG
[Raw transfer]



ICT_A_3(7ACN)
ACON_PIG
[Raw transfer]



MIC_A_3(1AMI)
ACON_BOVIN
[Raw transfer]



NTC_A_3(1NIS)
ACON_BOVIN
[Raw transfer]



SF4_A_4(1AMJ)
ACON_BOVIN
[Raw transfer]



SF4_A_3(1B0M)
ACON_PIG
[Raw transfer]



O_A_4(1C96)
ACON_BOVIN
[Raw transfer]



O_A_4(1B0K)
ACON_PIG
[Raw transfer]
21 PsiBlast_CBE 98.7552% -79 - C3 -2B3Y - ACOC_HUMAN -
2 PsiBlast_PDB 98.2452% -79 - C3 -2B3Y - ACOC_HUMAN -
1 PsiBlast_PDB 98.2152% -80 - C3 -2B3X - ACOC_HUMAN -
24 HHSearch 98.1552% -77 - C3 -2B3Y - ACOC_HUMAN -
3 PsiBlast_PDB 93.6052% -88 - C3 -3SNP - ACOC_RABIT -
4 PsiBlast_PDB 93.1052% -89 - C3 -3SN2 - ACOC_RABIT -
11 PsiBlast_PDB 70.3627% -56 - C3 -1B0J 5.2 ACON_PIG
8 PsiBlast_PDB 70.2927% -56 - C3 -1C97 - ACON_BOVIN -
10 PsiBlast_PDB 70.1127% -54 - C3 -1C96 2.8 ACON_BOVIN
14 PsiBlast_PDB 69.9626% -55 - C3 -1FGH - ACON_BOVIN -
12 PsiBlast_PDB 69.7927% -56 - C3 -1B0M 2.8 ACON_PIG
7 PsiBlast_PDB 69.7127% -56 - C3 -7ACN 5.7 ACON_PIG
25 HHSearch 69.6428% -54 - C3 -1C96 - ACON_BOVIN -
17 PsiBlast_PDB 69.5026% -56 - C3 -1AMJ 2.9 ACON_BOVIN
13 PsiBlast_PDB 69.5026% -56 - C3 -1ACO - ACON_BOVIN -
9 PsiBlast_PDB 69.5027% -55 - C3 -1B0K 2.8 ACON_PIG
15 PsiBlast_PDB 69.3926% -56 - C3 -8ACN 5.8 ACON_BOVIN
19 PsiBlast_PDB 69.3626% -56 - C3 -1NIT - ACON_BOVIN -
16 PsiBlast_PDB 69.3126% -56 - C3 -1AMI 5.6 ACON_BOVIN
18 PsiBlast_PDB 68.9926% -55 - C3 -1NIS 4.7 ACON_BOVIN