@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1664: (2016-03-27 )
LAKNRHLFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGNEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFNQPVRIDTIVVSTQHHPDITQEQIAKDLHTYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRRPIYRQTAAFGHFGRSDLDLPWERTDKAEALKKLIVK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3PO_A_3(4ODJ)
?
[Raw transfer]




ATP_B_9(1O93)
METK1_RAT
[Raw transfer]




SAM_A_3(2P02)
METK2_HUMAN
[Raw transfer]




SAM_A_4(2OBV)
METK1_HUMAN
[Raw transfer]




SAM_A_3(2P02)
METK2_HUMAN
[Raw transfer]




SAM_A_2(4ODJ)
?
[Raw transfer]




ATP_B_9(1O9T)
METK1_RAT
[Raw transfer]




AMB_C_3(1QM4)
METK1_RAT
[Raw transfer]




LIS_A_3(1O90)
METK1_RAT
[Raw transfer]




AMB_C_3(1QM4)
METK1_RAT
[Raw transfer]




ADP_B_9(1O92)
METK1_RAT
[Raw transfer]




UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]




UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]




UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]




50 HHSearch 97.7963% -79 - C4 -1P7L - METK_ECOLI -
21 PsiBlast_CBE 96.7961% -78 - C4 -1RG9 - METK_ECOLI -
22 PsiBlast_CBE 96.4461% -78 - C4 -1RG9 - METK_ECOLI -
3 PsiBlast_PDB 96.3361% -78 - C4 -1RG9 - METK_ECOLI -
25 PsiBlast_CBE 96.2561% -77 - C4 -1P7L - METK_ECOLI -
2 PsiBlast_PDB 96.2261% -78 - C4 -1P7L - METK_ECOLI -
24 PsiBlast_CBE 96.1661% -78 - C4 -1P7L - METK_ECOLI -
23 PsiBlast_CBE 95.8861% -77 - C4 -1RG9 - METK_ECOLI -
49 HHSearch 95.8260% -78 - C4 -2P02 5.2 METK2_HUMAN
26 PsiBlast_CBE 95.7961% -78 - C4 -1P7L - METK_ECOLI -
14 PsiBlast_PDB 95.3259% -80 - C4 -2P02 5.2 METK2_HUMAN
43 PsiBlast_CBE 95.1259% -82 - C4 -4NDN - METK2_HUMAN -
38 PsiBlast_CBE 95.1059% -82 - C4 -4KTT - METK2_HUMAN -
40 PsiBlast_CBE 94.7559% -80 - C4 -4KTT - METK2_HUMAN -
35 PsiBlast_CBE 94.6059% -82 - C4 -4KTV - METK2_HUMAN -
41 PsiBlast_CBE 94.5859% -82 - C4 -4NDN - METK2_HUMAN -
37 PsiBlast_CBE 93.7859% -83 - C4 -4KTV - METK2_HUMAN -
7 PsiBlast_PDB 93.5060% -82 - C4 -2OBV 5.0 METK1_HUMAN
28 PsiBlast_CBE 92.7557% -81 - C4 -3S82 2.8 METK_MYCA1
31 PsiBlast_CBE 92.7359% -84 - C4 -1O9T 3.6 METK1_RAT
8 PsiBlast_PDB 92.6859% -86 - C4 -1QM4 2.0 METK1_RAT
48 HHSearch 92.5158% -82 - C4 -3S82 2.8 METK_MYCA1
9 PsiBlast_PDB 92.4659% -85 - C4 -1O90 3.0 METK1_RAT
10 PsiBlast_PDB 92.4059% -84 - C4 -1O92 2.9 METK1_RAT
18 PsiBlast_PDB 92.3050% -76 - C4 -4ODJ 5.1 ?
11 PsiBlast_PDB 92.1759% -84 - C4 -1O93 3.1 METK1_RAT
5 PsiBlast_PDB 91.7257% -81 - C4 -3S82 2.8 METK_MYCA1
64 Fugue 55.6655%-104 * C4 *1QM4 2.0 METK1_RAT