@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1702: (2016-03-27 )
MISGLSHITLIVKDLNKTTTFLREIFNAEEIYSSGDQTFSLSKEKFFLIAGLWICIMEGDSLQEQTYNHIAFRIQSEEVDEYIERIKSLGVEIKPERPRVEGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1KM_A_4(4JH9)
FOSB_BACC1
[Raw transfer]




1KM_A_6(4JH7)
FOSB_BACC1
[Raw transfer]




FCN_A_4(4JD1)
FOSB2_BACAN
[Raw transfer]




FCN_A_4(4JH5)
FOSB_BACC1
[Raw transfer]




FCN_B_7(4JD1)
FOSB2_BACAN
[Raw transfer]




FCN_B_8(4IR0)
FOSB2_BACAN
[Raw transfer]




FCN_A_4(4IR0)
FOSB2_BACAN
[Raw transfer]




FCN_A_6(4JH3)
FOSB_BACC1
[Raw transfer]




GG6_D_15(2P7Q)
?
[Raw transfer]




GG6_A_14(2P7Q)
?
[Raw transfer]




GG6_F_17(2P7Q)
?
[Raw transfer]




GOL_B_7(2P7L)
FOSX_LISMO
[Raw transfer]




GG6_E_18(2P7Q)
?
[Raw transfer]




CIT_C_3(2P7K)
FOSX_LISMO
[Raw transfer]




GG6_C_16(2P7Q)
?
[Raw transfer]




GG6_B_13(2P7Q)
?
[Raw transfer]




PPF_A_7(1NKI)
FOSA_PSEAE
[Raw transfer]




CIT_D_4(2P7K)
FOSX_LISMO
[Raw transfer]




CYS_A_7(4JH8)
FOSB_BACC1
[Raw transfer]




24 PsiBlast_CBE 95.8592%-122 - C3 -2P7P - FOSX_LISMO -
22 PsiBlast_CBE 95.7392%-117 - C3 -2P7P - FOSX_LISMO -
4 PsiBlast_PDB 95.5292%-125 - C3 -2P7O - FOSX_LISMO -
26 PsiBlast_CBE 95.1592%-137 - C3 -2P7O - FOSX_LISMO -
30 PsiBlast_CBE 95.1491%-113 - C3 -2P7Q 4.1 ?
32 PsiBlast_CBE 94.9591%-128 - C3 -2P7Q 3.7 ?
3 PsiBlast_PDB 94.8092%-130 - C3 -2P7M - FOSX_LISMO -
6 PsiBlast_PDB 94.0691%-122 - C3 -2P7Q 4.0 ?
21 PsiBlast_CBE 93.9892%-122 - C3 -2P7P - FOSX_LISMO -
29 PsiBlast_CBE 93.9691%-118 - C3 -2P7Q 4.5 ?
31 PsiBlast_CBE 93.9591%-123 - C3 -2P7Q 4.2 ?
49 HHSearch 93.7387%-131 - C3 -2P7O - FOSX_LISMO -
23 PsiBlast_CBE 93.3692%-122 - C3 -2P7P - FOSX_LISMO -
1 PsiBlast_PDB 93.2792%-135 - C3 -2P7K 2.8 FOSX_LISMO
5 PsiBlast_PDB 93.2292%-123 - C3 -2P7P - FOSX_LISMO -
28 PsiBlast_CBE 92.7592%-134 - C3 -2P7K 3.2 FOSX_LISMO
2 PsiBlast_PDB 92.4792%-124 - C3 -2P7L - FOSX_LISMO -
27 PsiBlast_CBE 90.9092%-129 - C3 -2P7L 2.9 FOSX_LISMO
25 PsiBlast_CBE 90.0392%-120 - C3 -2P7P - FOSX_LISMO -
33 PsiBlast_CBE 89.6491%-120 - C3 -2P7Q 4.1 ?
8 PsiBlast_PDB 70.6334%-114 - C3 -4JD1 3.1 FOSB2_BACAN
35 PsiBlast_CBE 70.0534%-110 - C3 -4JD1 3.2 FOSB2_BACAN
36 PsiBlast_CBE 69.4833%-112 - C3 -4IR0 3.0 FOSB2_BACAN
9 PsiBlast_PDB 69.2033%-119 - C3 -4IR0 2.8 FOSB2_BACAN
51 HHSearch 65.7030%-114 - C3 -1NKI 3.7 FOSA_PSEAE