@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1739: (2016-03-28 )
MLEIKNLSKKFDQKTILDNVNITLQDGEILSIVGPSGGGKTTLLRCISGLEKMDAGEILIDGEKIDPMSRKDVENTIGVVFQEFHLFPHLSVLDNLILAPTLARKTKKADAVKEAERLLGLLDLADKANSMPYQLSGGQKQRVAIARALAMNPKVLLFDEPTSALDPDLRDHVAALILSLKKVGITQIIVTHDHTFAEKVADQMMEVEPLKKEAI

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




BME_A_2(3NH6)

[Raw transfer]




32 PsiBlast_CBE 91.8545%-112 - C1 -4U02 - ? -
7 PsiBlast_PDB 91.8445%-111 - C1 -4U00 - ? -
8 PsiBlast_PDB 90.4645%-111 - C1 -4U02 - ? -
33 PsiBlast_CBE 90.1745%-109 - C1 -4U02 - ? -
31 PsiBlast_CBE 89.9945%-107 - C1 -4U02 - ? -
127 HHSearch 89.3944%-109 - C1 -2OLJ - ? -
132 HHSearch 89.1540%-112 - C1 -1B0U - HISP_SALTY -
2 PsiBlast_PDB 88.6445%-116 - C1 -2OLJ - ? -
22 PsiBlast_CBE 88.4145%-116 - C1 -3C4J - ? -
27 PsiBlast_CBE 88.0245%-110 - C1 -2OLK - ? -
26 PsiBlast_CBE 87.7345%-108 - C1 -2OUK - ? -
30 PsiBlast_CBE 87.4845%-109 - C1 -2OLJ - ? -
23 PsiBlast_CBE 87.4645%-110 - C1 -2Q0H - ? -
4 PsiBlast_PDB 87.4245%-116 - C1 -2OUK - ? -
24 PsiBlast_CBE 87.3145%-108 - C1 -2OUK - ? -
29 PsiBlast_CBE 87.2645%-109 - C1 -2OLK - ? -
1 PsiBlast_PDB 87.1745%-107 - C1 -3C41 - ? -
5 PsiBlast_PDB 87.0745%-109 - C1 -2Q0H - ? -
3 PsiBlast_PDB 86.9445%-106 - C1 -2OLK - ? -
28 PsiBlast_CBE 86.9245%-108 - C1 -2OLK - ? -
55 PsiBlast_CBE 84.8438%-120 - C1 -1B0U 6.3 HISP_SALTY
89 PsiBlast_CBE 83.1941%-105 - C1 -3FVQ 7.2 FBPC_NEIG1
117 HHSearch 80.4238% -95 - C1 -3FVQ 7.0 FBPC_NEIG1
90 PsiBlast_CBE 79.9941%-104 - C1 -3FVQ 7.0 FBPC_NEIG1
86 PsiBlast_CBE 75.5639%-110 - C1 -1L2T 4.8 Y796_METJA
88 PsiBlast_CBE 74.9839%-107 - C1 -3TIF 4.7 Y796_METJA
85 PsiBlast_CBE 73.1739%-108 - C1 -1L2T 5.1 Y796_METJA
87 PsiBlast_CBE 72.9139%-111 - C1 -3TIF 4.6 Y796_METJA
91 PsiBlast_CBE 71.3834%-107 - C1 -4MKI 2.1 ECFA2_CALS4
92 PsiBlast_CBE 71.0834%-108 - C1 -4MKI 2.0 ECFA2_CALS4
133 HHSearch 62.3832% -96 - C1 -3NH6 2.9