Study : Lmo1761 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

Download fasta file
Download text file


Binding Site Number :C7_S1
Best Complexes choosen after comparative docking [pKd > 3] : 2 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C7_S1
Complex: TRP_A_2(4US3) / Model_67(4US3/A) = [5.3] Download4265.3439.91MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFFLLFLVLTLLVVMPLLIAEFVIGRGSGGDAVQAYKTLAPGTKWSLLGKLGVVGASILFSFYSVVGGWIITYLIKTLAGGIAGENQASLLHDFQVTTANPWISVGATILFILLNVIVISRGVVSGIEKMSKFMMPALFILFIVLIIRSLTLPGAMEGVAFFLRPDFSHFTAQTVLITLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAIFPAAFSFNITPDAGPGLLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNAGVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIILPVGALFIAIFVGYRLPRELLLKEFTTSSHFGKKVFIVWLFLIKYIAPIAIILVFLSATGLIDFLF
Complex: TRP_A_2(4US3) / Model_1(4US3/A) = [5.3] Download4285.5240.96MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFFLLFLVLTLLVVMPLLIAEFVIGRGSGGDAVQAYKTLAPGTKWSLLGKLGVVGASILFSFYSVVGGWIITYLIKTLAGGIAGENQASLLHDFQVTTANPWISVGATILFILLNVIVISRGVVSGIEKMSKFMMPALFILFIVLIIRSLTLPGAMEGVAFFLRPDFSHFTAQTVLITLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAIFPAAFSFNITPDAGPGLLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNAGVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIILPVGALFIAIFVGYRLPRELLLKEFTTSSHFGKKVFIVWLFLIKYIAPIAIILVFLSATGLIDFLF
Consensus
[pKd Mean = 5.30]
-4275
(s=10)
40
(s=0)
MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFFLLFLVLTLLVVMPLLIAEFVIGRGSGGDAVQAYKTLAPGTKWSLLGKLGVVGASILFSFYSVVGGWIITYLIKTLAGGIAGENQASLLHDFQVTTANPWISVGATILFILLNVIVISRGVVSGIEKMSKFMMPALFILFIVLIIRSLTLPGAMEGVAFFLRPDFSHFTAQTVLITLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAIFPAAFSFNITPDAGPGLLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNAGVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIILPVGALFIAIFVGYRLPRELLLKEFTTSSHFGKKVFIVWLFLIKYIAPIAIILVFLSATGLIDFLF