@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1831: (2016-03-29 )
MSIEKQVAEQLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEIDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGEDMETLKEWKKNPEKWGK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PRP_C_7(4RV4)
PYRE_BACAN
[Raw transfer]




PRP_B_6(4RV4)
PYRE_BACAN
[Raw transfer]




GOL_B_7(2AEE)
PYRE_STRP1
[Raw transfer]




GOL_A_8(2AEE)
PYRE_STRP1
[Raw transfer]




21 PsiBlast_CBE 93.9761%-126 - C1 -4RV4 3.6 PYRE_BACAN
22 PsiBlast_CBE 93.7561%-122 - C1 -4RV4 4.5 PYRE_BACAN
68 HHSearch 93.6361%-124 - C1 -3M3H - PYRE_BACAN -
1 PsiBlast_PDB 93.6261%-126 * C1 *3M3H - PYRE_BACAN -
2 PsiBlast_PDB 92.9061%-125 - C1 -4RV4 - PYRE_BACAN -
67 HHSearch 87.2056%-116 - C1 -3DEZ - PYRE_STRMU -
23 PsiBlast_CBE 87.1056%-121 - C1 -3DEZ - PYRE_STRMU -
66 HHSearch 86.9656%-114 - C1 -2AEE 2.4 PYRE_STRP1
24 PsiBlast_CBE 86.8956%-116 - C1 -2AEE 3.6 PYRE_STRP1
3 PsiBlast_PDB 86.8656%-118 - C1 -3DEZ - PYRE_STRMU -
4 PsiBlast_PDB 86.8456%-116 - C1 -2AEE - PYRE_STRP1 -
27 PsiBlast_CBE 80.4534%-108 - C1 -4OHC - ? -
25 PsiBlast_CBE 79.6134%-108 - C1 -4OHC - ? -
5 PsiBlast_PDB 79.3234%-111 - C1 -4OHC - ? -
26 PsiBlast_CBE 78.7134%-106 - C1 -4OHC - ? -
87 Fugue 77.7433%-106 - C1 -4OHC - ? -
28 PsiBlast_CBE 77.2334%-107 - C1 -4OHC - ? -
29 PsiBlast_CBE 76.8134%-105 - C1 -4OHC - ? -
75 HHSearch 73.1829%-117 - C1 -3QW4 - ? -
74 HHSearch 65.4831%-115 - C1 -2YZK - PYRE_AERPE -