@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1833: (2016-03-29 )
MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQFETPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLLGMRIDLKTRKPIIANGTGGLSGPAIKPVAIRMIHQVRAVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFTDPFICPKLISELPKRMDALGISSLQDLKKERTNQ

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ORO_A_7(1OVD)
PYRDA_LACLM
[Raw transfer]




ORO_B_8(1OVD)
PYRDA_LACLM
[Raw transfer]




OXC_A_5(2E6F)
PYRD_TRYCC
[Raw transfer]




DHB_B_8(2BSL)
PYRDA_LACLM
[Raw transfer]




ORO_B_6(2DOR)
PYRDA_LACLM
[Raw transfer]




ORO_A_4(1JRC)
PYRDA_LACLM
[Raw transfer]




ORO_A_6(1JQX)
PYRDA_LACLM
[Raw transfer]




ORO_B_6(1JRC)
PYRDA_LACLM
[Raw transfer]




ORO_A_4(1JRB)
PYRDA_LACLM
[Raw transfer]




ORO_A_4(2DOR)
PYRDA_LACLM
[Raw transfer]




34D_B_8(2BX7)
PYRDA_LACLM
[Raw transfer]




ORO_A_6(1JQV)
PYRDA_LACLM
[Raw transfer]




ORO_B_8(1JQV)
PYRDA_LACLM
[Raw transfer]




FMN_A_3(1EP2)
PYRDB_LACLM
[Raw transfer]




FMN_A_3(1EP3)
PYRDB_LACLM
[Raw transfer]




FMN_A_3(1EP1)
PYRDB_LACLM
[Raw transfer]




FMN_A_3(1EP3)
PYRDB_LACLM
[Raw transfer]




ORO_B_6(1JRB)
PYRDA_LACLM
[Raw transfer]




ACY_A_7(1JUE)
PYRDA_LACLM
[Raw transfer]




ACY_B_8(1JUE)
PYRDA_LACLM
[Raw transfer]




FAD_B_4(1EP3)
PYRDB_LACLM
[Raw transfer]




1 PsiBlast_PDB 96.0171%-122 - C2 -1EP1 8.8 PYRDB_LACLM
2 PsiBlast_PDB 95.5971%-121 - C2 -1EP2 8.6 PYRDB_LACLM
3 PsiBlast_PDB 95.5371%-119 - C2 -1EP3 8.1 PYRDB_LACLM
47 HHSearch 95.3771%-117 - C2 -1EP3 8.1 PYRDB_LACLM
69 Fugue 92.3269%-120 - C2 -1EP3 2.1 PYRDB_LACLM
20 PsiBlast_PDB 70.2629% -99 - C2 -4WZH - ? -
49 HHSearch 67.3226% -86 * C2 *2E6F 4.7 PYRD_TRYCC
14 PsiBlast_PDB 66.4031% -94 - C2 -1JRB 2.4 PYRDA_LACLM
70 Fugue 65.8329% -95 - C2 -2DOR - PYRDA_LACLM -
31 PsiBlast_CBE 65.6431% -95 - C2 -1JRB 3.5 PYRDA_LACLM
53 HHSearch 65.3627%-100 - C2 -1GTE - DPYD_PIG -
30 PsiBlast_CBE 64.9031% -96 - C2 -1JQX - PYRDA_LACLM -
50 HHSearch 64.8930% -94 - C2 -1JUB - PYRDA_LACLM -
29 PsiBlast_CBE 64.6431% -97 - C2 -1JRC 3.5 PYRDA_LACLM
23 PsiBlast_CBE 64.3532% -95 - C2 -2BSL 3.7 PYRDA_LACLM
21 PsiBlast_CBE 64.1232% -94 - C2 -2DOR 3.8 PYRDA_LACLM
24 PsiBlast_CBE 64.1132% -94 - C2 -1JUE 3.0 PYRDA_LACLM
13 PsiBlast_PDB 64.1131% -97 - C2 -1JRC 3.7 PYRDA_LACLM
22 PsiBlast_CBE 63.9932% -94 - C2 -2BX7 3.4 PYRDA_LACLM
71 Fugue 63.9127%-102 - C2 -1GTE - DPYD_PIG -
9 PsiBlast_PDB 63.6832% -97 - C2 -1JQV 2.7 PYRDA_LACLM
6 PsiBlast_PDB 63.6132% -94 - C2 -1JUE 3.0 PYRDA_LACLM
26 PsiBlast_CBE 63.4532% -97 - C2 -1JQV 2.7 PYRDA_LACLM
12 PsiBlast_PDB 63.3831% -95 - C2 -1JQX 3.7 PYRDA_LACLM
27 PsiBlast_CBE 63.3632% -94 - C2 -1OVD 3.4 PYRDA_LACLM
5 PsiBlast_PDB 63.3632% -94 - C2 -2DOR 3.7 PYRDA_LACLM
11 PsiBlast_PDB 63.1732% -94 - C2 -1OVD 3.6 PYRDA_LACLM