@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1877: (2016-03-29 )
MSNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKLSYDTIHSLKDKEPGKLVLVTAINPTPAGEGKSTVTVGLGDALSKKDKKTVIALREPSLGPTMGIKGGATGGGYAQVIPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLEIDGRRIVWKRVVDLNDRALRKVVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKDLKKRLSEIVIGYNYKKEPITVGEMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPFANIAHGCNSVSATSTALRLGDYVVTEAGFGADLGAEKFLDIKVPALGKAPDCVVIVATIRALKMHGGALKTELSEENVDALAKGFTNLQKHTESIQTFGIPYVVAINKFITDSDAEVAKLEALCEEHGIPFSLTEVWEKVAMAAWNSRIK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_10(4IOK)
FTHS_MOOTA
[Raw transfer]



ADP_A_4(4IOK)
FTHS_MOOTA
[Raw transfer]



ADP_B_9(4JJZ)
FTHS_MOOTH
[Raw transfer]



SAP_B_12(3QUS)
FTHS_MOOTH
[Raw transfer]



ADP_B_9(4IOL)
FTHS_MOOTA
[Raw transfer]



ADP_A_4(4IOL)
FTHS_MOOTA
[Raw transfer]



ADP_A_4(4JJZ)
FTHS_MOOTH
[Raw transfer]



SAP_A_7(3QUS)
FTHS_MOOTH
[Raw transfer]



ADP_A_5(4JKI)
FTHS_MOOTH
[Raw transfer]



FOL_A_10(4IOM)
FTHS_MOOTA
[Raw transfer]
4 PsiBlast_PDB 93.0964% -93 - C5 -4JKI 5.6 FTHS_MOOTH
25 PsiBlast_CBE 92.8464% -89 - C5 -4IOK 6.3 FTHS_MOOTA
6 PsiBlast_PDB 92.3964% -90 - C5 -4IOK 7.5 FTHS_MOOTA
54 Fugue 92.2961% -94 - C5 -1EG7 - FTHS_MOOTH -
21 PsiBlast_CBE 92.2964% -90 - C5 -4JJK - FTHS_MOOTH -
7 PsiBlast_PDB 92.2464% -91 - C5 -4IOL 5.6 FTHS_MOOTA
2 PsiBlast_PDB 92.2464% -91 - C5 -4JJK - FTHS_MOOTH -
5 PsiBlast_PDB 92.1564% -91 - C5 -4IOJ - FTHS_MOOTA -
3 PsiBlast_PDB 91.8764% -90 - C5 -4JJZ 6.7 FTHS_MOOTH
8 PsiBlast_PDB 91.8064% -89 - C5 -4IOM 4.2 FTHS_MOOTA
26 PsiBlast_CBE 91.7864% -89 - C5 -4IOJ - FTHS_MOOTA -
1 PsiBlast_PDB 91.7664% -93 - C5 -4JIM - FTHS_MOOTH -
19 PsiBlast_CBE 91.5464% -93 - C5 -4JKI - FTHS_MOOTH -
24 PsiBlast_CBE 91.4864% -91 - C5 -4IOL 4.9 FTHS_MOOTA
22 PsiBlast_CBE 91.3464% -92 - C5 -4JIM - FTHS_MOOTH -
20 PsiBlast_CBE 90.8164% -89 - C5 -4JJZ 6.0 FTHS_MOOTH
23 PsiBlast_CBE 90.4364% -88 - C5 -4IOM - FTHS_MOOTA -
12 PsiBlast_PDB 90.0763% -89 - C5 -1EG7 - FTHS_MOOTH -
11 PsiBlast_PDB 89.8863% -87 - C5 -3QUS 4.5 FTHS_MOOTH
55 Fugue 89.7261% -80 - C5 -1FPM - FTHS_MOOTH -
27 PsiBlast_CBE 89.6163% -85 - C5 -3QUS 5.6 FTHS_MOOTH