@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1908: (2016-03-30 )
MAKTMAEIQKEVDDFIGGFEEGYFSPLAMMARITEETGELAREINHYYGEKPKKTSEPTKTVAEELGDCLFVLTCMANSLDIDMEKAHDTVMAKFKDRDKDRWTKKEEKAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_6(2Q5Z)
?
[Raw transfer]
18 HHSearch 98.5170% -81 - C4 -2GTA - YPJD_BACSU -
1 PsiBlast_PDB 96.8967% -83 - C4 -2GTA - YPJD_BACSU -
19 HHSearch 75.8920% -57 - C4 -2A3Q - DCTP1_MOUSE -
42 Fugue 75.1019% -66 - C4 -2A3Q - DCTP1_MOUSE -
21 HHSearch 71.5121% -58 - C4 -2OIE - DCTP1_MOUSE -
22 HHSearch 70.8525% -56 - C4 -2Q5Z 3.0 ?
4 PsiBlast_PDB 69.4029% -71 - C4 -2Q5Z - ? -
2 PsiBlast_PDB 66.2930% -63 - C4 -2Q73 - ? -
3 PsiBlast_PDB 65.8130% -65 - C4 -2Q9L - ? -
20 HHSearch 65.4025% -52 - C4 -2Q73 - ? -
47 Fugue 63.1716% -15 * C4 *3CRA - MAZG_ECOLI -
7 PsiBlast_PDB 62.8027% -69 - C4 -2A3Q - DCTP1_MOUSE -
6 PsiBlast_PDB 62.5227% -66 - C4 -2OIG - DCTP1_MOUSE -
23 HHSearch 61.1116% -65 - C4 -2YXH - ? -
8 PsiBlast_PDB 60.6327% -59 - C4 -2Q4P - DCTP1_MOUSE -
27 HHSearch 59.6519% -31 - C4 -2YF4 - ? -
5 PsiBlast_PDB 58.9927% -61 - C4 -2OIE - DCTP1_MOUSE -
25 HHSearch 58.3220% -38 - C4 -3CRA - MAZG_ECOLI -
49 Fugue 56.1716% -29 - C4 -4TQL - ? -
26 HHSearch 50.9728% -57 - C4 -1VMG - ? -