@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1915: (2016-03-30 )
MTLKSGFDYMNNPLLNKGTAFSKEERASYQLDGLLPPIIETIEQQAVRIETQIENLETPLHKHRLLTNLYNENRTLYYYVVTKNVTDYLPIIYTPTIGDAVIQYHKDYTAPDEALFVDAFAPEKLSASIKNYAKNNPNIDMIVITDGEGVLGIGDWSVNGVKIAVGKLAVYTVAAGLAPDRVLPVVIDAGTNNETLLNDPLYLGNKRPRLSESEYDAFIASFVNVMKEVFPKAILHWEDFGRANASRILHNYRDKICTFNDDIQGTGAMVVAAVLATIQVSRIPLSEQKIIIFGAGTAGIGIADQLSAQLMRETGLPFEKAKKHFYLVDRKGLVLDNMTDLTTGQKKYAHPSAEWSNVPTDTLENLVEAVHPTMLIGCSGVTGAFKESIVKKMTQYTERPAILPLSNPTKLAEATASDLIQWTDGKALIVTGSPSKPVEYQNTTYEIGQANNALLYPGLGLGALVTRAKYITDDMLAAASMAVAEQISPNKAGAALLPHVRTLRETSRAVAIAVANQAIKENIHQVELTNVIEAIELEMWQPIYKGV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_E_5(1LLQ)
MAOM_ASCSU
[Raw transfer]



NAI_I_9(1O0S)
MAOM_ASCSU
[Raw transfer]



NAI_I_9(1O0S)
MAOM_ASCSU
[Raw transfer]



NAI_J_10(1O0S)
MAOM_ASCSU
[Raw transfer]



NAD_F_6(1LLQ)
MAOM_ASCSU
[Raw transfer]



NAD_A_3(1QR6)
MAOM_HUMAN
[Raw transfer]



NAD_E_5(1LLQ)
MAOM_ASCSU
[Raw transfer]



GOL_A_14(3NV9)
?
[Raw transfer]
31 HHSearch 96.2635% -98 - C3 -1O0S 9.2 MAOM_ASCSU
32 HHSearch 95.8536% -98 - C3 -1GQ2 - MAOX_COLLI -
30 HHSearch 95.3935% -98 - C3 -1PJ3 - MAOM_HUMAN -
4 PsiBlast_PDB 94.5636% -95 - C3 -1O0S 9.2 MAOM_ASCSU
1 PsiBlast_PDB 94.2538%-106 - C3 -2AW5 - MAOX_HUMAN -
3 PsiBlast_PDB 93.8736% -96 - C3 -1LLQ 8.1 MAOM_ASCSU
24 PsiBlast_CBE 93.6636%-101 - C3 -1GZ3 - MAOM_HUMAN -
21 PsiBlast_CBE 93.6436% -96 - C3 -1O0S 9.1 MAOM_ASCSU
5 PsiBlast_PDB 93.5336%-103 - C3 -1GZ3 - MAOM_HUMAN -
23 PsiBlast_CBE 93.2236%-101 - C3 -1GZ3 - MAOM_HUMAN -
25 PsiBlast_CBE 93.0836%-100 - C3 -1GZ3 - MAOM_HUMAN -
22 PsiBlast_CBE 93.0236% -97 - C3 -1LLQ 8.7 MAOM_ASCSU
2 PsiBlast_PDB 92.9536% -94 - C3 -1GQ2 - MAOX_COLLI -
12 PsiBlast_PDB 91.3436%-102 - C3 -1PJ4 - MAOM_HUMAN -
10 PsiBlast_PDB 91.3236%-101 - C3 -1GZ4 - MAOM_HUMAN -
11 PsiBlast_PDB 91.1936%-102 - C3 -1DO8 - MAOM_HUMAN -
13 PsiBlast_PDB 91.0736%-100 - C3 -1PJ2 - MAOM_HUMAN -
8 PsiBlast_PDB 90.9436%-101 - C3 -1EFL - MAOM_HUMAN -
7 PsiBlast_PDB 90.7536%-102 - C3 -1EFK - MAOM_HUMAN -
14 PsiBlast_PDB 90.5936% -99 - C3 -1PJ3 - MAOM_HUMAN -
6 PsiBlast_PDB 90.5036%-101 - C3 -1QR6 9.3 MAOM_HUMAN
54 Fugue 65.9231%-102 - C3 -1LLQ 8.3 MAOM_ASCSU