@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1954: (2016-03-30 )
MPDKFKRVHVVVMDSVGIGEAPDAAKFGDFDVDTFGHIAKHVGGLKMPEMGKLGLSNIREIEGIKKAEKPLAYYTKMQEASNGKDTMTGHWEIMGLYIDTPFRVFPDGFPDDLINQIEEKTGRKVIGNKPASGTEIMAELGEEHVKTGALIVYTSADSVLQIAAHEDVVPLEELYEICEFCRKITLDDPYMLGRIIARPFVGEPGAFVRTPNRHDYALKPFKPTVMDALKDGGKDVIAIGKISDIFDGEGVTESIRTKSNMDGMDQFIAVLDKDFNGMSFLNLVDFDALFGHRRDPQGYADALVDFDGRLVEVMEKLTDDDLLIITADHGNDPTYTGTDHTREFVPLLVYSPRFKNGGSELELRKTFADLGATVADNFDVKMPEYGTSFLRDLK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G16_A_9(3OT9)
DEOB_BACCR
[Raw transfer]



G16_A_9(3OT9)
DEOB_BACCR
[Raw transfer]



HSX_A_10(3M8Z)
DEOB_BACCR
[Raw transfer]



HSX_A_9(4LR8)
DEOB_BACCR
[Raw transfer]



G16_A_7(3UO0)
DEOB_BACCR
[Raw transfer]



HSX_A_10(4LR8)
DEOB_BACCR
[Raw transfer]



HSX_A_9(4LRF)
DEOB_BACCR
[Raw transfer]



HSX_A_10(4LRF)
DEOB_BACCR
[Raw transfer]



1X4_A_7(4LRB)
DEOB_BACCR
[Raw transfer]



1X4_A_8(4LR9)
DEOB_BACCR
[Raw transfer]



2PG_A_4(1O98)
GPMI_GEOSE
[Raw transfer]



KOP_A_10(3Q3Q)
ALPH_SPHSX
[Raw transfer]
22 PsiBlast_CBE 98.7773% -97 - C5 -3UN3 - DEOB_BACCR -
24 PsiBlast_CBE 98.6573% -95 - C5 -3UN2 - DEOB_BACCR -
36 PsiBlast_CBE 98.4973% -97 - C5 -4LRE - DEOB_BACCR -
46 PsiBlast_CBE 98.4873% -96 - C5 -3M8W - DEOB_BACCR -
23 PsiBlast_CBE 98.4373% -98 - C5 -3UN3 - DEOB_BACCR -
59 PsiBlast_CBE 98.4173% -95 - C5 -4LRA - DEOB_BACCR -
45 PsiBlast_CBE 98.4073% -96 - C5 -3M8W - DEOB_BACCR -
50 PsiBlast_CBE 98.3473% -96 - C5 -4LR9 - DEOB_BACCR -
42 PsiBlast_CBE 98.3473% -97 - C5 -3M8Z - DEOB_BACCR -
51 PsiBlast_CBE 98.3373% -97 - C5 -4LR8 - DEOB_BACCR -
41 PsiBlast_CBE 98.3073% -96 - C5 -3OT9 - DEOB_BACCR -
49 PsiBlast_CBE 98.2673% -96 - C5 -4LR9 - DEOB_BACCR -
43 PsiBlast_CBE 98.2673% -96 - C5 -3M8Y - DEOB_BACCR -
38 PsiBlast_CBE 98.2073% -95 - C5 -3UO0 - DEOB_BACCR -
57 PsiBlast_CBE 98.1873% -96 - C5 -4LRB - DEOB_BACCR -
40 PsiBlast_CBE 98.0573% -95 - C5 -3OT9 - DEOB_BACCR -
25 PsiBlast_CBE 98.0573% -97 - C5 -3UN2 - DEOB_BACCR -
10 PsiBlast_PDB 98.0073% -96 - C5 -3M8Z - DEOB_BACCR -
52 PsiBlast_CBE 97.8573% -95 - C5 -4LR8 - DEOB_BACCR -
58 PsiBlast_CBE 97.8273% -97 - C5 -4LRB - DEOB_BACCR -
79 HHSearch 97.7974% -96 - C5 -3OT9 3.6 DEOB_BACCR
19 PsiBlast_PDB 97.6073% -95 - C5 -4LRF 3.1 DEOB_BACCR
18 PsiBlast_PDB 97.5073% -95 - C5 -4LRB 4.0 DEOB_BACCR
9 PsiBlast_PDB 97.5073% -96 - C5 -3OT9 3.6 DEOB_BACCR
16 PsiBlast_PDB 97.3273% -96 - C5 -4LR9 2.2 DEOB_BACCR
21 PsiBlast_CBE 97.0374% -95 - C5 -3M8Z 3.9 DEOB_BACCR
12 PsiBlast_PDB 96.6773% -95 - C5 -3UO0 2.7 DEOB_BACCR
15 PsiBlast_PDB 96.4973% -94 - C5 -4LR8 3.5 DEOB_BACCR