@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2090: (2016-03-31 )
MAKEKIVLAYSGGLDTSVAIQWLVESGYEVIACCLDVGEGKNLDFIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLVEVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVVSPVRDWKWSREEEINYAKEHDIPVPIDLDNPFSIDQNLWGRSNECGVLENPWTTPPEAAYDLTVSLEDAPDTADIVEITFDAGIPISLNGENMSLANLILTLNEIAGKHGVGRIDHIENRLVGIKSREVYECPAAVTLITAHKELEDLTFVREVAHFKPIIEQKISETIYNGLWFSPLTEALVAFLKSTQKFVNGTIRVKLFKGHAIVEGRKSPNSLYDENLATYTSSDTFDQDAAVGFIKLWGLPTKVNAEVNSKVTITTEV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4XFJ)
?
[Raw transfer]



ANP_B_11(4XFJ)
?
[Raw transfer]



ASP_A_3(2NZ2)
ASSY_HUMAN
[Raw transfer]



ASP_E_5(1K97)
ASSY_ECOLI
[Raw transfer]



CIR_A_4(2NZ2)
ASSY_HUMAN
[Raw transfer]



CIR_A_4(2NZ2)
ASSY_HUMAN
[Raw transfer]



CIR_Q_17(1KP3)
ASSY_ECOLI
[Raw transfer]



EDO_A_7(4U7J)
?
[Raw transfer]



EDO_B_12(4U7J)
?
[Raw transfer]
2 PsiBlast_PDB 95.2651% -95 - C4 -4XFJ 5.0 ?
1 PsiBlast_PDB 94.9151% -92 - C4 -4U7J 2.4 ?
21 PsiBlast_CBE 94.8951% -90 - C4 -4XFJ 4.9 ?
35 PsiBlast_CBE 94.7448% -92 - C4 -1J21 - ASSY_THET8 -
39 PsiBlast_CBE 94.6648% -90 - C4 -1J20 - ASSY_THET8 -
4 PsiBlast_PDB 94.5848% -93 - C4 -1KH2 - ASSY_THET8 -
36 PsiBlast_CBE 94.4848% -91 - C4 -1J21 - ASSY_THET8 -
29 PsiBlast_CBE 94.3348% -91 - C4 -1KH2 - ASSY_THET8 -
34 PsiBlast_CBE 94.1848% -92 - C4 -1KH1 - ASSY_THET8 -
31 PsiBlast_CBE 93.9848% -91 - C4 -1KH2 - ASSY_THET8 -
26 PsiBlast_CBE 93.7248% -91 - C4 -1KH3 - ASSY_THET8 -
44 Fugue 93.7049% -90 - C4 -1KOR - ASSY_THET8 -
25 PsiBlast_CBE 93.6948% -90 - C4 -1KOR - ASSY_THET8 -
40 PsiBlast_CBE 93.5548% -90 - C4 -1J20 - ASSY_THET8 -
28 PsiBlast_CBE 93.4648% -90 - C4 -1KH3 - ASSY_THET8 -
30 PsiBlast_CBE 93.4548% -92 - C4 -1KH2 - ASSY_THET8 -
23 PsiBlast_CBE 93.4548% -91 - C4 -1KOR - ASSY_THET8 -
3 PsiBlast_PDB 93.3848% -91 - C4 -1KH1 - ASSY_THET8 -
32 PsiBlast_CBE 93.3748% -91 - C4 -1KH1 - ASSY_THET8 -
33 PsiBlast_CBE 93.2648% -90 - C4 -1KH1 - ASSY_THET8 -
22 PsiBlast_CBE 92.8651% -90 - C4 -4U7J 2.3 ?
55 HHSearch 92.7543% -84 - C4 -2NZ2 3.7 ASSY_HUMAN
12 PsiBlast_PDB 91.6241% -82 - C4 -2NZ2 4.1 ASSY_HUMAN