@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2182: (2016-04-01 )
MEVRDVNFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPNSGDVLLEGKSIFEWKAKEFAQNVAIVHQSNVLPNELMVKELLYFGRLPYKNWRMTRTKEDDLAVERALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILLLDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVAKGEPEELLTTDLIAETYGVVADVLNDANNGKYIVPQRRKEF

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ANP_C_9(4R9U)
BTUD_ECOLI
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_D_11(4R9U)
BTUD_ECOLI
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_A_3(2IXE)
TAP1_RAT
[Raw transfer]




ATP_D_15(2IXF)

[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_4(2D2F)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_6(3BK7)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ADP_B_3(3J15)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




108 Fugue 86.8330%-103 - C1 -1Z47 - ? -
21 PsiBlast_CBE 85.6536%-118 - C1 -4G1U - HMUV_YERPE -
1 PsiBlast_PDB 85.4636%-118 - C1 -4G1U - HMUV_YERPE -
28 PsiBlast_CBE 84.9131%-107 - C1 -4U02 - ? -
11 PsiBlast_PDB 83.9331%-107 - C1 -4U02 - ? -
26 PsiBlast_CBE 82.9331%-104 - C1 -4U02 - ? -
49 PsiBlast_CBE 82.8232%-111 - C1 -4FI3 - BTUD_ECOLI -
52 PsiBlast_CBE 82.8132%-109 - C1 -4DBL - BTUD_ECOLI -
6 PsiBlast_PDB 82.7033%-119 - C1 -4YMW - ? -
10 PsiBlast_PDB 82.6531%-108 - C1 -4U00 5.6 ?
23 PsiBlast_CBE 82.4833%-119 - C1 -4YMU 4.5 ?
54 PsiBlast_CBE 82.4632%-109 - C1 -4DBL - BTUD_ECOLI -
4 PsiBlast_PDB 82.4033%-119 - C1 -4YMU 5.2 ?
53 PsiBlast_CBE 82.3932%-109 - C1 -4DBL - BTUD_ECOLI -
3 PsiBlast_PDB 82.2233%-119 - C1 -4YMT - ? -
5 PsiBlast_PDB 81.4933%-120 - C1 -4YMV 4.6 ?
55 PsiBlast_CBE 81.1532%-109 - C1 -4DBL - BTUD_ECOLI -
14 PsiBlast_PDB 81.0431%-120 - C1 -4TQU - ? -
50 PsiBlast_CBE 80.4632%-112 - C1 -4FI3 - BTUD_ECOLI -
27 PsiBlast_CBE 80.3431%-109 - C1 -4U02 - ? -
17 PsiBlast_PDB 80.0432%-112 - C1 -2OLJ 4.2 ?
18 PsiBlast_PDB 79.7932%-113 - C1 -2OLK 4.6 ?
47 PsiBlast_CBE 78.8032%-107 - C1 -4R9U 4.6 BTUD_ECOLI
22 PsiBlast_CBE 78.4833%-114 - C1 -4YMV 4.1 ?
37 PsiBlast_CBE 77.7432%-106 - C1 -2OLK 4.3 ?
38 PsiBlast_CBE 77.6732%-109 - C1 -2OLK 5.1 ?
40 PsiBlast_CBE 77.1032%-104 - C1 -2OLJ 4.2 ?
31 PsiBlast_CBE 76.5532%-110 - C1 -3C4J 3.4 ?
48 PsiBlast_CBE 76.4732%-112 - C1 -4R9U 5.2 BTUD_ECOLI
39 PsiBlast_CBE 76.2132%-106 - C1 -2OLK 4.3 ?
32 PsiBlast_CBE 76.1132%-108 - C1 -3C4J 5.2 ?
43 PsiBlast_CBE 75.5431%-102 - C1 -2HYD 4.3 Y1866_STAAM
16 PsiBlast_PDB 75.0532%-104 - C1 -3C41 4.6 ?
44 PsiBlast_CBE 74.7231%-102 - C1 -2HYD 4.6 Y1866_STAAM
94 PsiBlast_CBE 74.1831%-100 - C1 -4HLU 6.2 ECFA1_THEMA
42 PsiBlast_CBE 74.1831%-101 - C1 -2ONJ 6.1 Y1866_STAAM
20 PsiBlast_PDB 73.7732%-107 - C1 -2Q0H 4.4 ?
90 PsiBlast_CBE 73.6031% -86 - C1 -4AYW 5.5 ABCBA_HUMAN
97 PsiBlast_CBE 73.2532%-104 - C1 -3FVQ 6.1 FBPC_NEIG1
30 PsiBlast_CBE 73.1832%-107 - C1 -3C41 5.7 ?
91 PsiBlast_CBE 73.1231% -84 - C1 -4AYX 5.7 ABCBA_HUMAN
41 PsiBlast_CBE 72.6831%-102 - C1 -2ONJ 6.1 Y1866_STAAM
33 PsiBlast_CBE 72.1132%-108 - C1 -2Q0H 5.1 ?
89 PsiBlast_CBE 71.6731% -90 - C1 -2IXE 7.5 TAP1_RAT
60 PsiBlast_CBE 71.1731% -80 - C1 -2IXF 7.8
92 PsiBlast_CBE 70.4531% -87 - C1 -4AYT 6.1 ABCBA_HUMAN
98 PsiBlast_CBE 70.1532%-107 - C1 -3FVQ 5.7 FBPC_NEIG1
95 PsiBlast_CBE 69.9632%-111 - C1 -4HLU 3.6 ECFA2_THEMA
57 PsiBlast_CBE 69.8934% -99 - C1 -3TIF 4.2 Y796_METJA
96 PsiBlast_CBE 69.7532%-111 - C1 -4HLU 3.2 ECFA2_THEMA
62 PsiBlast_CBE 68.5531% -84 - C1 -2IXF 7.4 TAP1_RAT
56 PsiBlast_CBE 68.2434%-106 - C1 -3TIF 4.2 Y796_METJA
61 PsiBlast_CBE 67.5431% -81 - C1 -2IXF 7.6 TAP1_RAT
104 PsiBlast_CBE 66.7831% -98 - C1 -2D2F 5.2 ?
63 PsiBlast_CBE 66.0631% -86 - C1 -2IXF 7.5 TAP1_RAT
99 PsiBlast_CBE 60.2232%-106 - C1 -4ZIR 3.5 ECFA2_THEMA
103 PsiBlast_CBE 46.0831%-107 - C1 -3BK7 3.8 ?
102 PsiBlast_CBE 43.3531%-105 - C1 -3J15 3.4 ?