@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2216: (2016-04-02 )
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5GP_B_6(4EGU)
?
[Raw transfer]



AMP_A_5(3O0M)
?
[Raw transfer]



AMP_A_3(3OMF)
HIT_ENTHI
[Raw transfer]



5GP_A_3(3OXK)
HIT_ENTHI
[Raw transfer]



ADN_A_2(3O1C)
HINT1_RABIT
[Raw transfer]



UNL_B_6(3LB5)
?
[Raw transfer]



UNL_D_8(3LB5)
?
[Raw transfer]



UNL_A_5(3LB5)
?
[Raw transfer]



UNL_A_5(3LB5)
?
[Raw transfer]



UNL_C_7(3LB5)
?
[Raw transfer]



EDO_A_6(3P0T)
?
[Raw transfer]



EDO_A_8(3P0T)
?
[Raw transfer]
70 HHSearch 93.5555%-123 - C5 -3IMI - ? -
3 PsiBlast_PDB 92.6655%-122 - C5 -3IMI - ? -
27 PsiBlast_CBE 90.4455%-123 - C5 -3IMI - ? -
25 PsiBlast_CBE 90.0955%-120 - C5 -3IMI - ? -
26 PsiBlast_CBE 90.0455%-119 - C5 -3IMI - ? -
72 HHSearch 89.6357%-118 - C5 -1Y23 - HIT_BACSU -
1 PsiBlast_PDB 89.6357%-118 - C5 -1Y23 - HIT_BACSU -
21 PsiBlast_CBE 89.2957%-116 - C5 -1Y23 - HIT_BACSU -
22 PsiBlast_CBE 88.7657%-116 - C5 -1Y23 - HIT_BACSU -
2 PsiBlast_PDB 88.4253%-124 - C5 -3L7X - ? -
24 PsiBlast_CBE 88.0857%-118 - C5 -1Y23 - HIT_BACSU -
75 HHSearch 87.7453%-120 - C5 -3L7X - ? -
23 PsiBlast_CBE 87.7257%-119 - C5 -1Y23 - HIT_BACSU -
73 HHSearch 82.4740%-116 - C5 -3LB5 2.5 ?
76 HHSearch 78.3737%-115 - C5 -3O0M - ? -
29 PsiBlast_CBE 76.6047%-115 - C5 -3LB5 2.6 ?
28 PsiBlast_CBE 75.0947%-125 - C5 -3LB5 2.8 ?
4 PsiBlast_PDB 74.1447%-124 - C5 -3LB5 2.5 ?
30 PsiBlast_CBE 73.9647%-125 - C5 -3LB5 2.7 ?
31 PsiBlast_CBE 73.8745%-123 - C5 -3O0M - ? -
5 PsiBlast_PDB 73.3245%-123 - C5 -3O0M 4.6 ?
79 HHSearch 72.1633%-108 - C5 -3P0T 2.5 ?
32 PsiBlast_CBE 68.5743%-120 - C5 -4EGU 6.4 ?
10 PsiBlast_PDB 62.8640%-118 - C5 -3OXK 5.8 HIT_ENTHI
9 PsiBlast_PDB 61.7940%-116 - C5 -3OMF 5.1 HIT_ENTHI
87 HHSearch 58.6332% -94 - C5 -3O1C 4.5 HINT1_RABIT