@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2251: (2016-04-02 )
VINIKNLHKHFGKLEVLKGIDLEIASGEVVVVIGPSGSGKSTFLRCLNLLEQPTTGTILFENKDLMAKQTNVNELRQKMGMVFQNFNLFPHKNVLENLMLAPMKVKNEDSAAAKKHALSLLEKVGLADKATSYPSQLSGGQQQRVAIARALAMNPDVMLFDEPTSALDPEMVGEVLSVMKSLAKEGMTMVVVTHEMGFAREVADRVVFMDAGVIQEQGTPEEVFGNPQNDRTKDFLGKVLA

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_H_8(2FGK)

[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
32 PsiBlast_CBE 95.5063%-121 - C1 -4YMU - ? -
29 PsiBlast_CBE 95.0067%-113 - C1 -2OLK - ? -
7 PsiBlast_PDB 94.6663%-121 - C1 -4YMS - ? -
2 PsiBlast_PDB 94.2167%-118 - C1 -2OLJ - ? -
127 HHSearch 94.0768%-118 - C1 -2OLJ - ? -
28 PsiBlast_CBE 93.9567%-113 - C1 -2OLK - ? -
31 PsiBlast_CBE 93.9463%-120 - C1 -4YMV - ? -
9 PsiBlast_PDB 93.9363%-120 - C1 -4YMU - ? -
10 PsiBlast_PDB 93.7063%-122 - C1 -4YMV - ? -
27 PsiBlast_CBE 93.6467%-116 - C1 -2OLK - ? -
11 PsiBlast_PDB 93.6063%-119 - C1 -4YMW - ? -
8 PsiBlast_PDB 93.2463%-121 - C1 -4YMT - ? -
6 PsiBlast_PDB 93.1767%-114 - C1 -3C4J - ? -
22 PsiBlast_CBE 93.1367%-117 - C1 -3C4J - ? -
4 PsiBlast_PDB 92.6867%-114 - C1 -2OUK - ? -
21 PsiBlast_CBE 92.3967%-115 - C1 -3C41 - ? -
5 PsiBlast_PDB 92.1667%-113 - C1 -2Q0H - ? -
1 PsiBlast_PDB 92.1267%-110 - C1 -3C41 - ? -
3 PsiBlast_PDB 91.7767%-112 - C1 -2OLK - ? -
24 PsiBlast_CBE 91.6567%-108 - C1 -2OUK - ? -
111 Fugue 78.5752%-112 - C1 -1B0U 5.8 HISP_SALTY
88 PsiBlast_CBE 74.5736%-104 - C1 -3FVQ 7.1 FBPC_NEIG1
89 PsiBlast_CBE 73.0036%-103 - C1 -3FVQ 6.7 FBPC_NEIG1
118 HHSearch 71.1436%-102 - C1 -3FVQ 6.7 FBPC_NEIG1
91 PsiBlast_CBE 67.7536%-111 - C1 -4MKI 2.0 ECFA2_CALS4
90 PsiBlast_CBE 66.5136%-111 - C1 -4MKI 2.2 ECFA2_CALS4
93 PsiBlast_CBE 60.6734% -99 - C1 -2PMK 5.5
94 PsiBlast_CBE 60.2434% -97 - C1 -2FF7 5.4
100 PsiBlast_CBE 57.5334% -97 - C1 -2FGK 6.4 HLYBP_ECOLX
97 PsiBlast_CBE 57.1534% -97 - C1 -2FGK 6.2
99 PsiBlast_CBE 56.0234% -96 - C1 -2FGK 6.2 HLYBP_ECOLX
98 PsiBlast_CBE 55.9734% -95 - C1 -2FGK 5.6 HLYBP_ECOLX