Study : Lmo2336 (atomeDB@cbs.cnrs.fr)


Main Binding Site Prediction:


Binding Site Prediction

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Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 2 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: ADP_D_6(2JGV) / Model_21(2JGV/D) = [4.0] Download1526.0610.56MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSRVLNQLNVPSLATGFLGGFTGSFIKDWLQNEGVKTGFVTVKDDTRINIKLKHGEETEINGLGPAISEKEINEFLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMIDTTGQELLDALPNRPILIKPNHHELADLFGVKLGSVEELIPYGKKCLELGAQHVIVSMAGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATGGATAFSTDLAQKELIDELLPQVKITKITGRN
Complex: F6P_A_5(3N1C) / Model_11(3N1C/A) = [4.1] Download870.380.75MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSRVLNQLNVPSLATGFLGGFTGSFIKDWLQNEGVKTGFVTVKDDTRINIKLKHGEETEINGLGPAISEKEINEFLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMIDTTGQELLDALPNRPILIKPNHHELADLFGVKLGSVEELIPYGKKCLELGAQHVIVSMAGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATGGATAFSTDLAQKELIDELLPQVKITKITGRN
Consensus
[pKd Mean = 4.05]
-1198
(s=327)
5
(s=4)
MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSRVLNQLNVPSLATGFLGGFTGSFIKDWLQNEGVKTGFVTVKDDTRINIKLKHGEETEINGLGPAISEKEINEFLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMIDTTGQELLDALPNRPILIKPNHHELADLFGVKLGSVEELIPYGKKCLELGAQHVIVSMAGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATGGATAFSTDLAQKELIDELLPQVKITKITGRN