@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2408: (2016-04-03 )
VVVTNIVKIIREKKGITQNELAHSLDVSRQTIHAIEKGKYNPSLELSLKIAKFFDLPVEEIFNLEGE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MTN_B_5(2XIU)
?
[Raw transfer]




GOL_B_5(2XI8)
?
[Raw transfer]




GOL_A_4(2XI8)
?
[Raw transfer]




GOL_A_3(2XI8)
?
[Raw transfer]




GOL_B_4(2XIU)
?
[Raw transfer]




22 PsiBlast_CBE 97.7057%-130 - C3 -2XIU 3.3 ?
23 PsiBlast_CBE 93.8157%-125 - C3 -2XI8 3.2 ?
24 PsiBlast_CBE 93.3157%-129 - C3 -1UTX - ? -
57 Fugue 93.1057%-120 - C3 -1UTX - ? -
3 PsiBlast_PDB 93.1057%-120 - C3 -1UTX - ? -
83 HHSearch 92.5458%-119 - C3 -2XI8 2.7 ?
2 PsiBlast_PDB 92.4757%-120 - C3 -2XIU - ? -
4 PsiBlast_PDB 92.2057%-136 - C3 -2GZU - ? -
5 PsiBlast_PDB 91.0257%-117 - C3 -2XI8 2.6 ?
1 PsiBlast_PDB 90.7057%-120 - C3 -2XJ3 - ? -
7 PsiBlast_PDB 90.3257%-120 - C3 -2LYK - ? -
9 PsiBlast_PDB 90.2457%-113 - C3 -2LYP - ? -
6 PsiBlast_PDB 90.2057%-107 - C3 -2LYJ - ? -
8 PsiBlast_PDB 89.7857%-118 - C3 -2LYL - ? -
70 HHSearch 83.2133%-122 - C3 -2B5A - ? -
10 PsiBlast_PDB 81.9357%-102 - C3 -2LYQ - ? -
36 PsiBlast_CBE 81.2037%-125 - C3 -2B5A - ? -
12 PsiBlast_PDB 81.1457%-101 - C2 -2LYS - ? -
14 PsiBlast_PDB 80.9137%-124 - C3 -2B5A - ? -
50 PsiBlast_CBE 76.0135% -97 - C3 -4I6U - ? -