@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2476: (2016-04-04 )
VIFIEVMKERFGEFEGETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLVDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRPDAVLFDPKSGRRLEMETKADSVLIYTANSLDGSFEIDERAVPKYAGITMETQGLVDAINHEGFGDIVLRPEKPFTSRTAFRFTVES

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLA_B_4(1NSU)
?
[Raw transfer]




GLA_A_3(1NSU)
?
[Raw transfer]




GLA_B_4(1NS8)
?
[Raw transfer]




GLA_A_3(1L7K)
?
[Raw transfer]




GLA_B_4(1NS0)
?
[Raw transfer]




GLA_B_4(1L7K)
?
[Raw transfer]




GAL_A_3(1NSX)
?
[Raw transfer]




GAL_A_3(1NSX)
?
[Raw transfer]




GAL_B_4(1NSX)
?
[Raw transfer]




XYS_A_3(1MN0)
?
[Raw transfer]




GLC_A_3(1NSZ)
?
[Raw transfer]




GLC_B_4(1NSZ)
?
[Raw transfer]




GAL_B_4(1NS2)
?
[Raw transfer]




BGC_B_5(1MMU)
?
[Raw transfer]




BGC_B_4(1NS7)
?
[Raw transfer]




FUC_B_4(1MMX)
?
[Raw transfer]




ARB_A_3(1MMZ)
?
[Raw transfer]




FUC_A_3(1MMX)
?
[Raw transfer]




ARB_B_4(1MMZ)
?
[Raw transfer]




BGC_A_3(1MMU)
?
[Raw transfer]




BGC_A_3(1NSS)
?
[Raw transfer]




BGC_B_5(1NSV)
?
[Raw transfer]




XYS_B_4(1MN0)
?
[Raw transfer]




BGC_B_4(1NSS)
?
[Raw transfer]




G6D_A_3(1MMY)
?
[Raw transfer]




GAL_A_3(1NSM)
?
[Raw transfer]




GOL_A_8(3IMH)
?
[Raw transfer]




GOL_A_8(3IMH)
?
[Raw transfer]




G6D_B_4(1MMY)
?
[Raw transfer]




GOL_B_15(3IMH)
?
[Raw transfer]




BGC_A_3(1NSV)
?
[Raw transfer]




22 PsiBlast_CBE 94.6138% -57 - C2 -1SO0 - GALM_HUMAN -
23 PsiBlast_CBE 93.8138% -56 - C2 -1SO0 - GALM_HUMAN -
1 PsiBlast_PDB 93.4938% -57 - C2 -1SNZ - GALM_HUMAN -
81 HHSearch 93.3038% -66 - C2 -1SNZ - GALM_HUMAN -
2 PsiBlast_PDB 92.5538% -58 - C2 -1SO0 - GALM_HUMAN -
45 PsiBlast_CBE 92.4932% -76 - C2 -3IMH 0.5 ?
21 PsiBlast_CBE 92.3538% -56 - C2 -1SO0 - GALM_HUMAN -
79 HHSearch 92.3431% -67 * C2 *1NSX 3.5 ?
3 PsiBlast_PDB 91.7534% -55 - C2 -4RNL - ? -
44 PsiBlast_CBE 91.3532% -75 - C2 -3IMH 0.4 ?
80 HHSearch 90.6433% -70 - C2 -3IMH 0.5 ?
69 Fugue 90.5831% -66 - C2 -1L7J - ? -
43 PsiBlast_CBE 88.7731% -66 - C2 -1NSM 3.5 ?
19 PsiBlast_PDB 88.5031% -65 - C2 -1NSX 3.5 ?
13 PsiBlast_PDB 88.4131% -66 - C2 -1NS8 - ? -
14 PsiBlast_PDB 88.3331% -66 - C2 -1NSR - ? -
33 PsiBlast_CBE 88.2731% -62 - C2 -1NS8 3.8 ?
5 PsiBlast_PDB 88.2231% -66 - C2 -1L7K 3.7 ?
30 PsiBlast_CBE 88.1531% -64 - C2 -1NS4 - ? -
20 PsiBlast_PDB 88.1431% -66 - C2 -1NSZ 3.5 ?
18 PsiBlast_PDB 88.0831% -66 - C2 -1NSV 2.6 ?
41 PsiBlast_CBE 88.0131% -64 - C2 -1NSS 2.4 ?
40 PsiBlast_CBE 87.8031% -63 - C2 -1NSS 3.1 ?
8 PsiBlast_PDB 87.8031% -67 - C2 -1MMY 2.9 ?
34 PsiBlast_CBE 87.7031% -64 - C2 -1NS7 3.6 ?
7 PsiBlast_PDB 87.6431% -65 - C2 -1MMX 3.7 ?
31 PsiBlast_CBE 87.6231% -64 - C2 -1NS0 3.4 ?
27 PsiBlast_CBE 87.3831% -64 - C2 -1MMX 3.7 ?
39 PsiBlast_CBE 87.3631% -64 - C2 -1NSU 3.4 ?
10 PsiBlast_PDB 87.3531% -65 - C2 -1MN0 3.0 ?
38 PsiBlast_CBE 87.1831% -65 - C2 -1NSV 2.9 ?
6 PsiBlast_PDB 87.1331% -65 - C2 -1MMU 2.6 ?
35 PsiBlast_CBE 87.0631% -63 - C2 -1NS2 3.5 ?
36 PsiBlast_CBE 87.0331% -63 - C2 -1NSZ 3.7 ?
29 PsiBlast_CBE 87.0031% -62 - C2 -1L7K 3.7 ?
26 PsiBlast_CBE 86.8231% -63 - C2 -1MMY 2.7 ?
25 PsiBlast_CBE 86.7031% -63 - C2 -1MMZ 3.2 ?
37 PsiBlast_CBE 86.6231% -60 - C2 -1NSX 3.4 ?
17 PsiBlast_PDB 86.6231% -65 - C2 -1NSU 3.4 ?
28 PsiBlast_CBE 86.5931% -64 - C2 -1MMU 2.6 ?
24 PsiBlast_CBE 86.5531% -63 - C2 -1MN0 3.3 ?
9 PsiBlast_PDB 86.3531% -64 - C2 -1MMZ 2.9 ?