@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2495: (2016-04-04 )
MTTETAEKVEYIIETKDVDLFYGSKQALQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQANPFPFSIYDNVAYGPRMHGIKDKKVLDEIVERSLRQAALWEEVHDRLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKDYTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_3(3VX4)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]



ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]
25 PsiBlast_CBE 91.7236% -90 - C1 -4U02 - ? -
24 PsiBlast_CBE 91.4636% -89 - C1 -4U02 - ? -
84 HHSearch 91.2634% -89 - C1 -1B0U - HISP_SALTY -
6 PsiBlast_PDB 90.6336% -93 - C1 -4U00 6.0 ?
7 PsiBlast_PDB 90.5736% -91 - C1 -4U02 - ? -
23 PsiBlast_CBE 90.4436% -88 - C1 -4U02 - ? -
33 PsiBlast_CBE 89.8636% -92 - C1 -2OLK 5.8 ?
10 PsiBlast_PDB 89.0936% -90 - C1 -2OUK - ? -
32 PsiBlast_CBE 88.6536% -88 - C1 -2OLK 6.2 ?
29 PsiBlast_CBE 88.4336% -86 - C1 -2OUK - ? -
26 PsiBlast_CBE 88.2636% -96 - C1 -3C4J 4.9 ?
13 PsiBlast_PDB 87.5736% -86 - C1 -3C41 7.0 ?
8 PsiBlast_PDB 87.2736% -96 - C1 -2OLJ 6.6 ?
11 PsiBlast_PDB 86.9436% -86 - C1 -2Q0H 5.5 ?
34 PsiBlast_CBE 86.7936% -89 - C1 -2OLJ 5.8 ?
12 PsiBlast_PDB 86.2436% -85 - C1 -3C4J 6.5 ?
5 PsiBlast_PDB 85.7936% -87 - C1 -4YMW - ? -
31 PsiBlast_CBE 85.6336% -88 - C1 -2OLK 5.9 ?
35 PsiBlast_CBE 85.0236% -88 - C1 -3C41 6.4 ?
22 PsiBlast_CBE 84.4136% -89 - C1 -4YMU 5.7 ?
3 PsiBlast_PDB 83.5836% -87 - C1 -4YMU 5.4 ?
27 PsiBlast_CBE 83.2336% -88 - C1 -2Q0H 5.7 ?
38 PsiBlast_CBE 83.0832% -86 - C1 -1B0U 5.8 HISP_SALTY
21 PsiBlast_CBE 82.7636% -87 - C1 -4YMV 4.8 ?
9 PsiBlast_PDB 82.5736% -88 - C1 -2OLK 6.0 ?
4 PsiBlast_PDB 80.6836% -88 - C1 -4YMV 5.6 ?
50 PsiBlast_CBE 64.7332% -77 - C1 -1L2T 4.6 Y796_METJA
52 PsiBlast_CBE 63.8532% -76 - C1 -3TIF 4.2 Y796_METJA
51 PsiBlast_CBE 63.1532% -80 - C1 -3TIF 4.5 Y796_METJA
49 PsiBlast_CBE 63.1132% -78 - C1 -1L2T 4.8 Y796_METJA
53 PsiBlast_CBE 62.9731% -88 - C1 -2ONJ 6.1 Y1866_STAAM
54 PsiBlast_CBE 62.0631% -88 - C1 -2ONJ 5.5 Y1866_STAAM
55 PsiBlast_CBE 60.9531% -91 - C1 -2HYD 4.4 Y1866_STAAM
56 PsiBlast_CBE 60.5631% -91 - C1 -2HYD 4.5 Y1866_STAAM
17 PsiBlast_PDB 59.6832% -86 - C1 -1VCI 3.7 ?
67 PsiBlast_CBE 55.1431% -79 - C1 -3VX4 6.6 ?