@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2496: (2016-04-04 )
MLTKKPEINTILQVTPDPHSLPAAMATEDLHVYYGDNHAIKGVDLTFPENKVTALIGPSGCGKSTYLRALNRMNDEIDGCRMEGQILYDGININRKEVDLYNVRKEIGMVFQKPNPFTKSIYENVAFGLKRHGMKNKKEIMERVEKSLRRAALWDEVKDDLGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPISTSKIEDLINELKNKYTIIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQEKQTEDYISGNFG

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ATP_C_9(1MV5)
LMRA_LACLA
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ADP_B_8(1MV5)
LMRA_LACLA
[Raw transfer]




ADP_D_10(1MV5)

[Raw transfer]




119 HHSearch 94.0637% -82 - C1 -1B0U - HISP_SALTY -
92 Fugue 90.3933% -78 - C1 -3TUZ - METN_ECOLI -
16 PsiBlast_PDB 86.6433% -74 - C1 -3TUZ - METN_ECOLI -
37 PsiBlast_CBE 85.4333% -71 - C1 -3TUZ - METN_ECOLI -
38 PsiBlast_CBE 85.3733% -71 - C1 -3TUZ - METN_ECOLI -
40 PsiBlast_CBE 85.2933% -73 - C1 -3TUI - METN_ECOLI -
15 PsiBlast_PDB 84.7533% -72 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 83.9439% -88 - C1 -3C4J 4.8 ?
41 PsiBlast_CBE 83.7633% -66 - C1 -3TUI - METN_ECOLI -
19 PsiBlast_PDB 83.6035% -87 - C1 -1B0U - HISP_SALTY -
29 PsiBlast_CBE 83.2839% -83 - C1 -2OLK 6.1 ?
27 PsiBlast_CBE 83.2739% -83 - C1 -2OUK - ? -
32 PsiBlast_CBE 83.1339% -81 - C1 -2OLJ 5.9 ?
8 PsiBlast_PDB 83.0539% -76 - C1 -3C41 6.8 ?
7 PsiBlast_PDB 83.0539% -81 - C1 -3C4J 6.6 ?
4 PsiBlast_PDB 83.0039% -81 - C1 -2OLK 6.1 ?
39 PsiBlast_CBE 82.8233% -68 - C1 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 82.7739% -84 - C1 -2OLJ 6.2 ?
30 PsiBlast_CBE 82.6739% -82 - C1 -2OLK 6.2 ?
33 PsiBlast_CBE 82.6439% -81 - C1 -3C41 5.9 ?
31 PsiBlast_CBE 82.0639% -86 - C1 -2OLK 5.9 ?
35 PsiBlast_CBE 81.8437% -78 - C1 -4YMU 5.8 ?
6 PsiBlast_PDB 81.5639% -79 - C1 -2Q0H 5.5 ?
1 PsiBlast_PDB 80.9136% -81 - C1 -4U00 6.1 ?
11 PsiBlast_PDB 80.6137% -78 - C1 -4YMU 5.4 ?
25 PsiBlast_CBE 80.2439% -82 - C1 -2Q0H 5.8 ?
34 PsiBlast_CBE 79.9337% -78 - C1 -4YMV 5.2 ?
12 PsiBlast_PDB 78.9637% -80 - C1 -4YMV 5.5 ?
97 Fugue 78.9134% -76 - C1 -1B0U 5.3 HISP_SALTY
48 PsiBlast_CBE 69.0631% -81 - C1 -1VCI 3.7 ?
74 PsiBlast_CBE 67.6434% -82 - C1 -1L2T 4.8 Y796_METJA
75 PsiBlast_CBE 67.3234% -81 - C1 -1L2T 4.7 Y796_METJA
76 PsiBlast_CBE 66.9234% -82 - C1 -3TIF 4.5 Y796_METJA
77 PsiBlast_CBE 66.3834% -79 - C1 -3TIF 4.4 Y796_METJA
83 PsiBlast_CBE 59.8131% -77 - C1 -2ONJ 5.6 Y1866_STAAM
82 PsiBlast_CBE 58.4231% -77 - C1 -2ONJ 6.0 Y1866_STAAM
85 PsiBlast_CBE 58.0131% -79 - C1 -2HYD 4.5 Y1866_STAAM
84 PsiBlast_CBE 57.6231% -79 - C1 -2HYD 4.4 Y1866_STAAM
50 PsiBlast_CBE 53.4332% -92 - C1 -3NHB 6.4
52 PsiBlast_CBE 53.3532% -89 - C1 -3NH9 6.4
51 PsiBlast_CBE 53.1332% -93 - C1 -3NHA 6.3
79 PsiBlast_CBE 39.3731% -68 - C1 -1MV5 4.0 LMRA_LACLA
80 PsiBlast_CBE 38.3831% -54 - C1 -1MV5 4.3 LMRA_LACLA
81 PsiBlast_CBE 38.1031% -64 - C1 -1MV5 5.2 LMRA_LACLA
78 PsiBlast_CBE 37.1731% -55 - C1 -1MV5 2.9